RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 SERTM2A0A1B0GWG4 89 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 C7orf71A4D174 169 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 FBLL1A6NHQ2 334 aaKnown RBP4.02□□□□□ -1.77
SUDS3-202ENST00000541280 SNURFLB1AK76 121 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 KLLNB2CW77 178 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 SLC17A3O00476 420 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 TAAR5O14804 337 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 ATP5G1P05496 136 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 GPX1P07203 203 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 CT45A10P0DMU9 189 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 HTN1P15515 57 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 ATP5G3P48201 142 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 RANP62826 216 aaKnown RBP4.02□□□□□ -1.77
SUDS3-202ENST00000541280 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
SUDS3-202ENST00000541280 MIR17HGQ75NE6 70 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 BAP18Q8IXM2 172 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 OR2G3Q8NGZ4 309 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 CMTM2Q8TAZ6 248 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 RNASE8Q8TDE3 154 aaKnown RBP4.02□□□□□ -1.77
SUDS3-202ENST00000541280 FXYD5Q96DB9 178 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 GNPNAT1Q96EK6 184 aaPredicted RBP4.02□□□□□ -1.77
SUDS3-202ENST00000541280 FAM19A4Q96LR4 140 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 C18orf15Q96N68 181 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 PSMG3Q9BT73 122 aaPredicted RBP4.02□□□□□ -1.77
SUDS3-202ENST00000541280 AGPAT4-IT1Q9H0P7 198 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 OTORQ9NRC9 128 aa4.02□□□□□ -1.77
SUDS3-202ENST00000541280 STAB2Q8WWQ8 2551 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 H3BNG1 76 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 H3BTX0 84 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 ZNF324O75467 553 aaPredicted RBP4.01□□□□□ -1.77
SUDS3-202ENST00000541280 SNRPCP09234 159 aaKnown RBP4.01□□□□□ -1.77
SUDS3-202ENST00000541280 DEFB130BP0DP73 79 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 DEFB130AP0DP74 79 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 PYYP10082 97 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 AZU1P20160 251 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 ZNF138P52744 262 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 CCL18P55774 89 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 SLAQ13239 276 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 LGALS9BQ3B8N2 356 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 GCSAMLQ5JQS6 135 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 IBA57Q5T440 356 aaKnown RBP4.01□□□□□ -1.77
SUDS3-202ENST00000541280 LINC00336Q6ZUF6 198 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 ZNF767PQ75MW2 155 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 EXOC3-AS1Q8N2X6 119 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 EIF4E3Q8N5X7 224 aaKnown RBP4.01□□□□□ -1.77
SUDS3-202ENST00000541280 STPG4Q8N801 248 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 OR10G4Q8NGN3 311 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 OR10G9Q8NGN4 311 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 OR10G7Q8NGN6 311 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 SMIM3Q9BZL3 60 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 ZNF492Q9P255 531 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 TNFSF18Q9UNG2 199 aa4.01□□□□□ -1.77
SUDS3-202ENST00000541280 TRAV12-3A0A0B4J271 114 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 PLAC8L1A1L4L8 177 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 PGPA6NDG6 321 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 F5H768 121 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 K7EQM0 130 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 M0R3E3 92 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 OR10J4P0C629 311 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 HTN3P15516 51 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 RNASE4P34096 147 aaKnown RBP4□□□□□ -1.77
SUDS3-202ENST00000541280 UBE2L3P68036 154 aaKnown RBP4□□□□□ -1.77
SUDS3-202ENST00000541280 SOHLH1Q5JUK2 328 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 UBE2DNLQ8IWF7 75 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 LINC00612Q8N6U2 182 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 ATG101Q9BSB4 218 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 NKX6-2Q9C056 277 aaPredicted RBP4□□□□□ -1.77
SUDS3-202ENST00000541280 ACTR3CQ9C0K3 210 aaPredicted RBP4□□□□□ -1.77
SUDS3-202ENST00000541280 Q9H3A6 140 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 WFDC1Q9HC57 220 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 NOP10Q9NPE3 64 aaKnown RBP4□□□□□ -1.77
SUDS3-202ENST00000541280 TMEM167BQ9NRX6 74 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 TP53TG3Q9ULZ0 132 aa4□□□□□ -1.77
SUDS3-202ENST00000541280 IGHV1OR15-1A0A075B7D0 117 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 CIDEAO60543 219 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 CXorf1O96002 111 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 STAG3L2P0CL84 134 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 STAG3L3P0CL85 134 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 CDC34P49427 236 aaPredicted RBP3.99□□□□□ -1.77
SUDS3-202ENST00000541280 TCL1AP56279 114 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 EIF5AP63241 154 aaKnown RBP3.99□□□□□ -1.77
SUDS3-202ENST00000541280 ERCC8Q13216 396 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 SAPCD1Q5SSQ6 148 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 Q6AWC8 147 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 ZFAND2AQ8N6M9 145 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 OR2T35Q8NGX2 323 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 SUN5Q8TC36 379 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 VGLL1Q99990 258 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 SPXQ9BT56 116 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 NDFIP1Q9BT67 221 aa3.99□□□□□ -1.77
SUDS3-202ENST00000541280 COL7A1Q02388 2944 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 TRGV2A0A075B6R0 118 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 IGKV2-40A0A087WW87 121 aaPredicted RBP3.98□□□□□ -1.77
SUDS3-202ENST00000541280 FXYD6-FXYD2A0A087WZ82 144 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 TRAV21A0A0B4J279 112 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 IGKV3D-20A0A0C4DH25 116 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 A0A1W2PRE2 83 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 J3KRW8 73 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 IGKV2D-40P01614 121 aaPredicted RBP3.98□□□□□ -1.77
SUDS3-202ENST00000541280 PRM2P04554 102 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms