RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 EXOC3-AS1Q8N2X6 119 aa4.56□□□□□ -1.68
CHD4-206ENST00000536999 FAM57AQ8TBR7 257 aa4.56□□□□□ -1.68
CHD4-206ENST00000536999 PPDPFLQ8WWR9 84 aa4.56□□□□□ -1.68
CHD4-206ENST00000536999 TMEM141Q96I45 108 aa4.56□□□□□ -1.68
CHD4-206ENST00000536999 C1QTNF4Q9BXJ3 329 aa4.56□□□□□ -1.68
CHD4-206ENST00000536999 SPANXB1Q9NS25 103 aaPredicted RBP4.56□□□□□ -1.68
CHD4-206ENST00000536999 TP73-AS1Q9UF72 201 aa4.56□□□□□ -1.68
CHD4-206ENST00000536999 KLK9Q9UKQ9 250 aa4.56□□□□□ -1.68
CHD4-206ENST00000536999 MINOS1-NBL1R4GNA1 71 aa4.56□□□□□ -1.68
CHD4-206ENST00000536999 TGP01266 2768 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 A0A096LNJ9 63 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 TRAV8-1A0A0A6YYK1 113 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.55□□□□□ -1.68
CHD4-206ENST00000536999 CENPVL3A0A0U1RRI6 287 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 A8MWV9 139 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 K7EIM0 57 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 MRPS12O15235 138 aaKnown RBP4.55□□□□□ -1.68
CHD4-206ENST00000536999 NPYP01303 97 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 SCGB1C2P0DMR2 95 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 LOXP28300 417 aaPredicted RBP4.55□□□□□ -1.68
CHD4-206ENST00000536999 CCL8P80075 99 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 ADORA2A-AS1P86434 159 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 SRSF9Q13242 221 aaKnown RBP eCLIP4.55□□□□□ -1.68
CHD4-206ENST00000536999 ADIPOQQ15848 244 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 MRPL23Q16540 153 aaKnown RBP4.55□□□□□ -1.68
CHD4-206ENST00000536999 CLEC2AQ6UVW9 174 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 COPS9Q8WXC6 57 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 CCL17Q92583 94 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 RNASE6Q93091 150 aaKnown RBP4.55□□□□□ -1.68
CHD4-206ENST00000536999 LINC00477Q96M19 166 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 TMEM160Q9NX00 188 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 ONECUT1Q9UBC0 465 aa4.55□□□□□ -1.68
CHD4-206ENST00000536999 IGLV11-55A0A075B6I3 123 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 TRBV7-1A0A0A6YYK4 115 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 E7EUB6 86 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 ZNHIT1O43257 154 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 SNAI2O43623 268 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 FCN3O75636 299 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 TFF1P04155 84 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 FAM106CPP0CH98 169 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 CCL3L1P16619 93 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 HLA-DMBP28068 263 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 CRIP1P50238 77 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 SSBP2P81877 361 aaPredicted RBP4.54□□□□□ -1.68
CHD4-206ENST00000536999 FOXI1Q12951 378 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 CDSNQ15517 529 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 C10orf55Q5SWW7 151 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 SCGB1D4Q6XE38 83 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 DTX2Q86UW9 622 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 PCP2Q8IVA1 136 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 TEX29Q8N6K0 151 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 PHLDA1Q8WV24 401 aaPredicted RBP4.54□□□□□ -1.68
CHD4-206ENST00000536999 SCGB3A1Q96QR1 104 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 HILPDAQ9Y5L2 63 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 TSSC4Q9Y5U2 329 aaPredicted RBP4.54□□□□□ -1.68
CHD4-206ENST00000536999 FREM1Q5H8C1 2179 aa4.54□□□□□ -1.68
CHD4-206ENST00000536999 TRAV21A0A0B4J279 112 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 TRAV40A0A0B4J280 105 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 LY6LH3BQJ8 138 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 OVOL1O14753 267 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 NCR2O95944 276 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 CD3EP07766 207 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 COX6CP09669 75 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 EGR2P11161 476 aaPredicted RBP4.53□□□□□ -1.68
CHD4-206ENST00000536999 CRYBA4P53673 196 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 FXYD2P54710 66 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 FAM201AQ5SY85 155 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
CHD4-206ENST00000536999 ZFAND6Q6FIF0 208 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 Q6Q795 121 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 C9orf47Q6ZRZ4 202 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 TEN1Q86WV5 123 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 TOMM6Q96B49 74 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 JMJD8Q96S16 334 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 METTL26Q96S19 204 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 GTSF1LQ9H1H1 148 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 DPH3P1Q9H4G8 78 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 GEMIN7Q9H840 131 aaKnown RBP4.53□□□□□ -1.68
CHD4-206ENST00000536999 MRPL36Q9P0J6 103 aaKnown RBP4.53□□□□□ -1.68
CHD4-206ENST00000536999 DKK2Q9UBU2 259 aa4.53□□□□□ -1.68
CHD4-206ENST00000536999 MEGF8Q7Z7M0 2845 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 NBEAL2Q6ZNJ1 2754 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 TMEM213A2RRL7 107 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 OVOL3O00110 214 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 SPINK8P0C7L1 97 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 ZNF688P0C7X2 276 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 PRTN3P24158 256 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 SUMO2P61956 95 aaKnown RBP4.52□□□□□ -1.69
CHD4-206ENST00000536999 GAGE5Q13069 117 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 GAGE6Q13070 117 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 EBI3Q14213 229 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 MRGPRG-AS1Q2M3A8 158 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 ETDBQ3ZM63 59 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 C9orf139Q6ZV77 190 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 LY6G5BQ8NDX9 201 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 EEF1AKMT3Q96AZ1 226 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 RNF183Q96D59 192 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 RNF185Q96GF1 192 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms