RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 NDUFS6O75380 124 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-209ENST00000536717 LTAP01374 205 aa12.64□□□□□ -0.39
TNFRSF1A-209ENST00000536717 HTN1P15515 57 aa12.64□□□□□ -0.39
TNFRSF1A-209ENST00000536717 HTN3P15516 51 aa12.64□□□□□ -0.39
TNFRSF1A-209ENST00000536717 SMUG1Q53HV7 270 aa12.64□□□□□ -0.39
TNFRSF1A-209ENST00000536717 SLC7A5P1Q8MH63 180 aa12.64□□□□□ -0.39
TNFRSF1A-209ENST00000536717 C8orf49Q96NF6 230 aa12.64□□□□□ -0.39
TNFRSF1A-209ENST00000536717 DNAH2Q9P225 4427 aa12.64□□□□□ -0.39
TNFRSF1A-209ENST00000536717 PEA15Q15121 130 aa12.63□□□□□ -0.39
TNFRSF1A-209ENST00000536717 RNASE8Q8TDE3 154 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-209ENST00000536717 FAM210BQ96KR6 192 aa12.63□□□□□ -0.39
TNFRSF1A-209ENST00000536717 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
TNFRSF1A-209ENST00000536717 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 GCGP01275 180 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 S100A1P23297 94 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 Q6AWC8 147 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 BAGE2Q86Y30 109 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 PYGO2Q9BRQ0 406 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 SMDT1Q9H4I9 107 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 TMEM183AQ8IXX5 376 aa12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 TMEM263Q8WUH6 116 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-209ENST00000536717 P0DMU3 169 aa12.61□□□□□ -0.39
TNFRSF1A-209ENST00000536717 FAM231AP0DMU4 169 aa12.61□□□□□ -0.39
TNFRSF1A-209ENST00000536717 FAM231CP0DMU5 169 aa12.61□□□□□ -0.39
TNFRSF1A-209ENST00000536717 DEFB130BP0DP73 79 aa12.61□□□□□ -0.39
TNFRSF1A-209ENST00000536717 DEFB130AP0DP74 79 aa12.61□□□□□ -0.39
TNFRSF1A-209ENST00000536717 CEBPGP53567 150 aa12.61□□□□□ -0.39
TNFRSF1A-209ENST00000536717 ZNF493Q6ZR52 646 aa12.61□□□□□ -0.39
TNFRSF1A-209ENST00000536717 PFN1P07737 140 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-209ENST00000536717 SRP19P09132 144 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-209ENST00000536717 GNG4P50150 75 aa12.6□□□□□ -0.39
TNFRSF1A-209ENST00000536717 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
TNFRSF1A-209ENST00000536717 CENPWQ5EE01 88 aa12.6□□□□□ -0.39
TNFRSF1A-209ENST00000536717 COX8CQ7Z4L0 72 aa12.6□□□□□ -0.39
TNFRSF1A-209ENST00000536717 PARLQ9H300 379 aa12.6□□□□□ -0.39
TNFRSF1A-209ENST00000536717 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-209ENST00000536717 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
TNFRSF1A-209ENST00000536717 ZNF80P51504 273 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-209ENST00000536717 TMEM88Q6PEY1 159 aa12.59□□□□□ -0.39
TNFRSF1A-209ENST00000536717 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
TNFRSF1A-209ENST00000536717 NHLRC2Q8NBF2 726 aa12.59□□□□□ -0.39
TNFRSF1A-209ENST00000536717 ZC2HC1AQ96GY0 325 aa12.59□□□□□ -0.39
TNFRSF1A-209ENST00000536717 FAT2Q9NYQ8 4349 aa12.59□□□□□ -0.39
TNFRSF1A-209ENST00000536717 DNAH17Q9UFH2 4485 aa12.58□□□□□ -0.39
TNFRSF1A-209ENST00000536717 IGHV1OR15-1A0A075B7D0 117 aa12.58□□□□□ -0.4
TNFRSF1A-209ENST00000536717 FAM159AQ6UWV7 190 aa12.58□□□□□ -0.4
TNFRSF1A-209ENST00000536717 Q6ZQT7 251 aa12.58□□□□□ -0.4
TNFRSF1A-209ENST00000536717 SMIM12Q96EX1 92 aa12.58□□□□□ -0.4
TNFRSF1A-209ENST00000536717 NOP10Q9NPE3 64 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-209ENST00000536717 NAGKQ9UJ70 344 aa12.58□□□□□ -0.4
TNFRSF1A-209ENST00000536717 FABP5P3A8MUU1 101 aa12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 SRSF3P84103 164 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 MUC21Q5SSG8 566 aa12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 FAM162BQ5T6X4 162 aa12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 EIF4E3Q8N5X7 224 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 LINC00467Q9BRT7 94 aa12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 MLST8Q9BVC4 326 aa12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 CBY3A6NI87 242 aa12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 C9JCJ5 164 aa12.57□□□□□ -0.4
TNFRSF1A-209ENST00000536717 MUC4Q99102 2169 aa12.56□□□□□ -0.4
TNFRSF1A-209ENST00000536717 HECTD4Q9Y4D8 3996 aa12.56□□□□□ -0.4
TNFRSF1A-209ENST00000536717 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
TNFRSF1A-209ENST00000536717 LINC00612Q8N6U2 182 aa12.56□□□□□ -0.4
TNFRSF1A-209ENST00000536717 KCNS1Q96KK3 526 aa12.56□□□□□ -0.4
TNFRSF1A-209ENST00000536717 SMIM7Q9BQ49 75 aa12.56□□□□□ -0.4
TNFRSF1A-209ENST00000536717 ZNF727A8MUV8 499 aa12.55□□□□□ -0.4
TNFRSF1A-209ENST00000536717 C9JQL5 133 aa12.55□□□□□ -0.4
TNFRSF1A-209ENST00000536717 ATP5G1P05496 136 aa12.55□□□□□ -0.4
TNFRSF1A-209ENST00000536717 MGST1P10620 155 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-209ENST00000536717 TDRG1Q3Y452 100 aa12.55□□□□□ -0.4
TNFRSF1A-209ENST00000536717 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
TNFRSF1A-209ENST00000536717 PRR27Q6MZM9 219 aa12.55□□□□□ -0.4
TNFRSF1A-209ENST00000536717 BIN3Q9NQY0 253 aa12.55□□□□□ -0.4
TNFRSF1A-209ENST00000536717 F5H768 121 aa12.54□□□□□ -0.4
TNFRSF1A-209ENST00000536717 SH2D1AO60880 128 aa12.54□□□□□ -0.4
TNFRSF1A-209ENST00000536717 CRIP1P50238 77 aa12.54□□□□□ -0.4
TNFRSF1A-209ENST00000536717 C15orf53Q8NAA6 179 aa12.54□□□□□ -0.4
TNFRSF1A-209ENST00000536717 SDF2L1Q9HCN8 221 aa12.54□□□□□ -0.4
TNFRSF1A-209ENST00000536717 TRGV11A0A075B6L2 103 aa12.53□□□□□ -0.4
TNFRSF1A-209ENST00000536717 PGPEP1LA6NFU8 196 aa12.53□□□□□ -0.4
TNFRSF1A-209ENST00000536717 IGLV2-8P01709 118 aa12.53□□□□□ -0.4
TNFRSF1A-209ENST00000536717 FAM74A3Q4VXF1 159 aa12.53□□□□□ -0.4
TNFRSF1A-209ENST00000536717 COMMD7Q86VX2 200 aa12.53□□□□□ -0.4
TNFRSF1A-209ENST00000536717 SNURFLB1AK76 121 aa12.52□□□□□ -0.4
TNFRSF1A-209ENST00000536717 ORM1P02763 201 aa12.52□□□□□ -0.4
TNFRSF1A-209ENST00000536717 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.4
TNFRSF1A-209ENST00000536717 UBE2DNLQ8IWF7 75 aa12.52□□□□□ -0.4
TNFRSF1A-209ENST00000536717 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.4
TNFRSF1A-209ENST00000536717 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-209ENST00000536717 UQCC3Q6UW78 93 aa12.52□□□□□ -0.41
TNFRSF1A-209ENST00000536717 C11orf72Q8NBR9 251 aa12.52□□□□□ -0.41
TNFRSF1A-209ENST00000536717 OCC1Q8TAD7 63 aa12.52□□□□□ -0.41
TNFRSF1A-209ENST00000536717 DAZAP1Q96EP5 407 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-209ENST00000536717 C11orf21Q9P2W6 132 aa12.52□□□□□ -0.41
TNFRSF1A-209ENST00000536717 LY96Q9Y6Y9 160 aa12.52□□□□□ -0.41
TNFRSF1A-209ENST00000536717 ZNF415Q09FC8 603 aa12.51□□□□□ -0.41
TNFRSF1A-209ENST00000536717 DAZ2Q13117 558 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-209ENST00000536717 RNF212Q495C1 297 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms