RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 RHPN1-AS1Q9BWJ2 59 aa10.15□□□□□ -0.79
VPS33B-202ENST00000535906 ZNF580Q9UK33 172 aa10.15□□□□□ -0.79
VPS33B-202ENST00000535906 IGKV3-7A0A075B6H7 116 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 NUDT3O95989 172 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 COX8AP10176 69 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 PRR9Q5T870 116 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 PRSS57Q6UWY2 283 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 DPF1Q92782 380 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 PEF1Q9UBV8 284 aaKnown RBP10.14□□□□□ -0.79
VPS33B-202ENST00000535906 ZNF469Q96JG9 3925 aaPredicted RBP10.14□□□□□ -0.79
VPS33B-202ENST00000535906 DOPEY2Q9Y3R5 2298 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 IGHV7-4-1A0A0J9YVY3 117 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 C12orf54Q6X4T0 127 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 Q6ZVH6 145 aa10.14□□□□□ -0.79
VPS33B-202ENST00000535906 DAZ1Q9NQZ3 744 aaKnown RBP10.14□□□□□ -0.79
VPS33B-202ENST00000535906 NBPF19A0A087WUL8 3843 aa10.13□□□□□ -0.79
VPS33B-202ENST00000535906 FXYD7P58549 80 aa10.13□□□□□ -0.79
VPS33B-202ENST00000535906 DEFB113Q30KQ7 82 aa10.13□□□□□ -0.79
VPS33B-202ENST00000535906 BVES-AS1Q5T3Y7 98 aa10.13□□□□□ -0.79
VPS33B-202ENST00000535906 MAP1LC3AQ9H492 121 aa10.13□□□□□ -0.79
VPS33B-202ENST00000535906 APCP25054 2843 aa10.13□□□□□ -0.79
VPS33B-202ENST00000535906 LINC01546A6NGU7 62 aa10.13□□□□□ -0.79
VPS33B-202ENST00000535906 FSHBP01225 129 aa10.13□□□□□ -0.79
VPS33B-202ENST00000535906 J3KRW8 73 aa10.12□□□□□ -0.79
VPS33B-202ENST00000535906 Q5PR19 223 aa10.12□□□□□ -0.79
VPS33B-202ENST00000535906 IFI27L1Q96BM0 104 aa10.12□□□□□ -0.79
VPS33B-202ENST00000535906 SRD5A1P18405 259 aa10.12□□□□□ -0.79
VPS33B-202ENST00000535906 CACNG7P62955 275 aa10.12□□□□□ -0.79
VPS33B-202ENST00000535906 SMPXQ9UHP9 88 aa10.12□□□□□ -0.79
VPS33B-202ENST00000535906 F6UB75 175 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 TNFRSF6BO95407 300 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 Q6YL49 198 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 OR1N2Q8NGR9 330 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 OR10J6PQ8NGY7 276 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 LINC00477Q96M19 166 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 VPREB3Q9UKI3 123 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 LENEPQ9Y5L5 61 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 CREBBPQ92793 2442 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 OVOL1O14753 267 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 CCL25O15444 150 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 PTTG1IPP53801 180 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 UBE2V1Q13404 147 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 C2orf91Q6ZV80 131 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 ZFAND2AQ8N6M9 145 aa10.11□□□□□ -0.79
VPS33B-202ENST00000535906 NXT2Q9NPJ8 142 aaKnown RBP10.11□□□□□ -0.79
VPS33B-202ENST00000535906 BEX4Q9NWD9 120 aaPredicted RBP10.11□□□□□ -0.79
VPS33B-202ENST00000535906 ANKRD39Q53RE8 183 aa10.1□□□□□ -0.79
VPS33B-202ENST00000535906 DEFB125Q8N687 156 aa10.1□□□□□ -0.79
VPS33B-202ENST00000535906 K7EMT4 169 aa10.09□□□□□ -0.79
VPS33B-202ENST00000535906 PRRC2AP48634 2157 aaKnown RBP10.09□□□□□ -0.79
VPS33B-202ENST00000535906 TAX1BP3O14907 124 aa10.09□□□□□ -0.79
VPS33B-202ENST00000535906 HOXA3O43365 443 aaPredicted RBP10.09□□□□□ -0.79
VPS33B-202ENST00000535906 FGF6P10767 208 aa10.09□□□□□ -0.79
VPS33B-202ENST00000535906 Q96MF0 132 aa10.09□□□□□ -0.79
VPS33B-202ENST00000535906 EVI2AP22794 236 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 FCER1GP30273 86 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 LRRC75A-AS1Q8N1F1 130 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 TMEM89A2RUT3 159 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 LEPP41159 167 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 KIR3DS1Q14943 382 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 ZNF702PQ9H963 129 aa10.08□□□□□ -0.8
VPS33B-202ENST00000535906 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
VPS33B-202ENST00000535906 SNAI2O43623 268 aa10.07□□□□□ -0.8
VPS33B-202ENST00000535906 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
VPS33B-202ENST00000535906 KRTAP1-3Q8IUG1 177 aa10.07□□□□□ -0.8
VPS33B-202ENST00000535906 DCANP1Q8TF63 244 aa10.07□□□□□ -0.8
VPS33B-202ENST00000535906 TENM4Q6N022 2769 aa10.07□□□□□ -0.8
VPS33B-202ENST00000535906 H3BVH4 76 aa10.07□□□□□ -0.8
VPS33B-202ENST00000535906 BOD1L2Q8IYS8 172 aa10.07□□□□□ -0.8
VPS33B-202ENST00000535906 Q8N8P6 123 aa10.07□□□□□ -0.8
VPS33B-202ENST00000535906 CD5LO43866 347 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 WFDC3Q8IUB2 231 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 C18orf15Q96N68 181 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 UFC1Q9Y3C8 167 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 IGLV2-18A0A075B6J9 118 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 TRAV21A0A0B4J279 112 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 PRSS47A8MTI9 375 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 RNASE4P34096 147 aaKnown RBP10.06□□□□□ -0.8
VPS33B-202ENST00000535906 SPANXN1Q5VSR9 72 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 OR2K2Q8NGT1 345 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 DUX5Q96PT3 197 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
VPS33B-202ENST00000535906 TLN2Q9Y4G6 2542 aa10.05□□□□□ -0.8
VPS33B-202ENST00000535906 SPRY2O43597 315 aa10.05□□□□□ -0.8
VPS33B-202ENST00000535906 VAMP3Q15836 100 aa10.05□□□□□ -0.8
VPS33B-202ENST00000535906 TMEM97Q5BJF2 176 aa10.05□□□□□ -0.8
VPS33B-202ENST00000535906 NRACQ8N912 160 aa10.05□□□□□ -0.8
VPS33B-202ENST00000535906 MYOZ3Q8TDC0 251 aa10.05□□□□□ -0.8
VPS33B-202ENST00000535906 SYNJ2BPP57105 145 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 ANXA2RQ3ZCQ2 193 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 APRG1Q8IVJ8 170 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 OR9G4Q8NGQ1 327 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 IGHV4OR15-8A0A075B7B6 117 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 A0A087WW49 117 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 TRAV26-2A0A0B4J265 109 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms