RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 C9orf118A6NHY6 69 aa14.27□□□□□ -0.12
SFSWAP-203ENST00000535236 PPDPFLQ8WWR9 84 aa14.27□□□□□ -0.12
SFSWAP-203ENST00000535236 CARD19Q96LW7 228 aa14.27□□□□□ -0.12
SFSWAP-203ENST00000535236 CITED2Q99967 270 aaPredicted RBP14.27□□□□□ -0.12
SFSWAP-203ENST00000535236 PKDREJQ9NTG1 2253 aa14.27□□□□□ -0.12
SFSWAP-203ENST00000535236 VWA8A3KMH1 1905 aa14.27□□□□□ -0.13
SFSWAP-203ENST00000535236 IGHV4-38-2P0DP08 117 aa14.27□□□□□ -0.13
SFSWAP-203ENST00000535236 ZNF493Q6ZR52 646 aa14.27□□□□□ -0.13
SFSWAP-203ENST00000535236 IGLC7A0M8Q6 106 aa14.27□□□□□ -0.13
SFSWAP-203ENST00000535236 RBAKDNA6NC62 111 aa14.27□□□□□ -0.13
SFSWAP-203ENST00000535236 PLXNA3P51805 1871 aa14.27□□□□□ -0.13
SFSWAP-203ENST00000535236 SPART-AS1P0CW21 52 aa14.26□□□□□ -0.13
SFSWAP-203ENST00000535236 ZNF524Q96C55 264 aa14.26□□□□□ -0.13
SFSWAP-203ENST00000535236 C16orf74Q96GX8 76 aa14.26□□□□□ -0.13
SFSWAP-203ENST00000535236 COX8AP10176 69 aa14.26□□□□□ -0.13
SFSWAP-203ENST00000535236 TINCRA0A1B0GVN0 87 aa14.26□□□□□ -0.13
SFSWAP-203ENST00000535236 MRPL23Q16540 153 aaKnown RBP14.26□□□□□ -0.13
SFSWAP-203ENST00000535236 BOD1L2Q8IYS8 172 aa14.26□□□□□ -0.13
SFSWAP-203ENST00000535236 ASPHD1Q5U4P2 390 aa14.25□□□□□ -0.13
SFSWAP-203ENST00000535236 ATP5G1P05496 136 aa14.25□□□□□ -0.13
SFSWAP-203ENST00000535236 SLC25A29Q8N8R3 303 aa14.25□□□□□ -0.13
SFSWAP-203ENST00000535236 CEND1Q8N111 149 aa14.25□□□□□ -0.13
SFSWAP-203ENST00000535236 LENEPQ9Y5L5 61 aa14.25□□□□□ -0.13
SFSWAP-203ENST00000535236 C11orf52Q96A22 123 aa14.25□□□□□ -0.13
SFSWAP-203ENST00000535236 GYPEP15421 78 aa14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 ETDCA0A1B0GVM5 59 aa14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 PRR20EP86478 221 aa14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 PRR20CP86479 221 aa14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 PRR20DP86480 221 aa14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 PRR20BP86481 221 aa14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 PRR20AP86496 221 aa14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 KLF2Q9Y5W3 355 aaPredicted RBP14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 CAMK2N2Q96S95 79 aa14.24□□□□□ -0.13
SFSWAP-203ENST00000535236 RNF152Q8N8N0 203 aa14.23□□□□□ -0.13
SFSWAP-203ENST00000535236 ZNF503Q96F45 646 aa14.23□□□□□ -0.13
SFSWAP-203ENST00000535236 Q9H8V8 135 aa14.23□□□□□ -0.13
SFSWAP-203ENST00000535236 EGR2P11161 476 aaPredicted RBP14.23□□□□□ -0.13
SFSWAP-203ENST00000535236 WT1P19544 449 aaPredicted RBP14.23□□□□□ -0.13
SFSWAP-203ENST00000535236 TIRAPP58753 221 aa14.23□□□□□ -0.13
SFSWAP-203ENST00000535236 C5orf38Q86SI9 138 aa14.23□□□□□ -0.13
SFSWAP-203ENST00000535236 ATP6V0E2Q8NHE4 81 aa14.23□□□□□ -0.13
SFSWAP-203ENST00000535236 Q6ZWC4 215 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 SH2D6Q7Z4S9 175 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 WIPF3A6NGB9 483 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 ARTNQ5T4W7 220 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 WIPF2Q8TF74 440 aaPredicted RBP14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 IGFBPL1Q8WX77 278 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 AJUBAQ96IF1 538 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 IGHV3-30P01768 117 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 IGHV3-33P01772 117 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 IGHV3-30-3P0DP02 117 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 IGHV3-30-5P0DP03 117 aa14.22□□□□□ -0.13
SFSWAP-203ENST00000535236 ZSWIM8A7E2V4 1837 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 F8W1H4 67 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 IGLC2P0DOY2 106 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 IGLC3P0DOY3 106 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 K7EQD1 137 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 IGLV3-1P01715 115 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 HERV-K104P63124 156 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 C11orf53Q8IXP5 236 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 NPBQ8NG41 125 aa14.21□□□□□ -0.13
SFSWAP-203ENST00000535236 PTPRDP23468 1912 aa14.21□□□□□ -0.14
SFSWAP-203ENST00000535236 DKK2Q9UBU2 259 aa14.21□□□□□ -0.14
SFSWAP-203ENST00000535236 K7EMI3 77 aa14.2□□□□□ -0.14
SFSWAP-203ENST00000535236 IGLL1P15814 213 aa14.2□□□□□ -0.14
SFSWAP-203ENST00000535236 SPANXA1Q9NS26 97 aa14.2□□□□□ -0.14
SFSWAP-203ENST00000535236 IGHV7-81A0A0B4J1V7 117 aa14.2□□□□□ -0.14
SFSWAP-203ENST00000535236 TRAV4A0A0B4J268 109 aa14.2□□□□□ -0.14
SFSWAP-203ENST00000535236 BVES-AS1Q5T3Y7 98 aa14.2□□□□□ -0.14
SFSWAP-203ENST00000535236 BLCAPP62952 87 aa14.2□□□□□ -0.14
SFSWAP-203ENST00000535236 IGHV4-4A0A075B6R2 117 aa14.2□□□□□ -0.14
SFSWAP-203ENST00000535236 IGFL2Q6UWQ7 119 aa14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 C10orf105Q8TEF2 133 aa14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 GPR179Q6PRD1 2367 aa14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 F8W735 103 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 ORMDL1Q9P0S3 153 aa14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 KIAA1671Q9BY89 1806 aa14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 IGLV10-54A0A075B6I4 117 aa14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 ETDBQ3ZM63 59 aa14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 SPANXDQ9BXN6 97 aa14.19□□□□□ -0.14
SFSWAP-203ENST00000535236 SIP14410 1827 aa14.18□□□□□ -0.14
SFSWAP-203ENST00000535236 SPRNQ5BIV9 151 aa14.18□□□□□ -0.14
SFSWAP-203ENST00000535236 WNK2Q9Y3S1 2297 aa14.18□□□□□ -0.14
SFSWAP-203ENST00000535236 K7EP34 96 aa14.18□□□□□ -0.14
SFSWAP-203ENST00000535236 SPRY2O43597 315 aa14.18□□□□□ -0.14
SFSWAP-203ENST00000535236 ZNF407Q9C0G0 2248 aa14.17□□□□□ -0.14
SFSWAP-203ENST00000535236 SPTAN1Q13813 2472 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-203ENST00000535236 COX7A2LO14548 114 aa14.17□□□□□ -0.14
SFSWAP-203ENST00000535236 K7ERJ3 54 aa14.17□□□□□ -0.14
SFSWAP-203ENST00000535236 K7EN84 100 aa14.16□□□□□ -0.14
SFSWAP-203ENST00000535236 IGF2-ASQ6U949 168 aa14.16□□□□□ -0.14
SFSWAP-203ENST00000535236 NRGNQ92686 78 aa14.16□□□□□ -0.14
SFSWAP-203ENST00000535236 DOCK8Q8NF50 2099 aa14.16□□□□□ -0.14
SFSWAP-203ENST00000535236 DAZ2Q13117 558 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 DAZ4Q86SG3 579 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 DAZ3Q9NR90 486 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 A0A1W2PPM0 123 aa14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 FUSP35637 526 aaKnown RBP eCLIP14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 ESM1Q9NQ30 184 aa14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 IGHV4OR15-8A0A075B7B6 117 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms