RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 WI2-2373I1.2A0A1W2PRP0 233 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 C7orf71A4D174 169 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 FAM24AA6NFZ4 105 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 NCBP2LA6PVI3 153 aaKnown RBP2.33□□□□□ -2.04
USP48-215ENST00000534705 F2Z2F3 143 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 H0Y980 276 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 PDE6DO43924 150 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 ZNF737O75373 536 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 OMGP23515 440 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 COL8A2P25067 703 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 HTR1DP28221 377 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 RBMXP38159 391 aaKnown RBP2.33□□□□□ -2.04
USP48-215ENST00000534705 MPV17P39210 176 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 VDAC2P45880 294 aaPredicted RBP2.33□□□□□ -2.04
USP48-215ENST00000534705 EFNA4P52798 201 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 DLX1P56177 255 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 CD164Q04900 197 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 LOXL1Q08397 574 aaPredicted RBP2.33□□□□□ -2.04
USP48-215ENST00000534705 KLRD1Q13241 179 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 ADIRFQ15847 76 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 LRRC75BQ2VPJ9 315 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 KRTAP21-3Q3LHN1 58 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 TMEM97Q5BJF2 176 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 NMSQ5H8A3 153 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 GCSAMLQ5JQS6 135 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 EBLN2Q6P2I7 272 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 SLC25A34Q6PIV7 304 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 RASL11AQ6T310 242 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 LCN15Q6UWW0 184 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 Q6ZR03 302 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 VSTM2AQ8TAG5 236 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 PIFOQ8TCI5 191 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 TSKUQ8WUA8 353 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 BLNKQ8WV28 456 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 PP6455Q8WZ26 134 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 PTH2Q96A98 100 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 FLYWCH2Q96CP2 140 aaKnown RBP2.33□□□□□ -2.04
USP48-215ENST00000534705 LINC01600Q96MT4 127 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 NMNAT3Q96T66 252 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 NDFIP1Q9BT67 221 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 DERL1Q9BUN8 251 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 OR2H1Q9GZK4 316 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 OR2D2Q9H210 308 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 NAA60Q9H7X0 242 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 ZNF702PQ9H963 129 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 IL36BQ9NZH7 164 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 NAT8BQ9UHF3 227 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 VPREB3Q9UKI3 123 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 POLR1DQ9Y2S0 133 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 IER3IP1Q9Y5U9 82 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 LHFPL6Q9Y693 200 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 TMEM14AQ9Y6G1 99 aa2.33□□□□□ -2.04
USP48-215ENST00000534705 TRRAPQ9Y4A5 3859 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 DNAH3Q8TD57 4116 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 TRBV20OR9-2A0A075B6H5 130 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 CTXND1A0A1B0GTU2 59 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 FAM240AA0A1B0GVK7 77 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 A0A1W2PPM0 123 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 GRIFINA4D1Z8 144 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 C5orf63A6NC05 138 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 C9JCJ5 164 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 F8W1H4 67 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 LYNX1G3V0Z9 82 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 RER1O15258 196 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 ZNF207O43670 478 aaKnown RBP2.32□□□□□ -2.04
USP48-215ENST00000534705 OXTP01178 125 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 IGKV1D-33P01593 117 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 IGKV1-33P01594 117 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 C8orf88P0DMB2 117 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 LYNX1P0DP58 116 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 COX8AP10176 69 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 CCL1P22362 96 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 S100GP29377 79 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 RPS27P42677 84 aaKnown RBP2.32□□□□□ -2.04
USP48-215ENST00000534705 GUCA1AP43080 201 aaPredicted RBP2.32□□□□□ -2.04
USP48-215ENST00000534705 DYNLT3P51808 116 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 ARFRP1Q13795 201 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 TBC1D28Q2M2D7 210 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 TMEM78Q5T7P6 136 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 FAM78BQ5VT40 261 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 Q6Q795 121 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 TMEM136Q6ZRR5 245 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 FA2HQ7L5A8 372 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 LYZL2Q7Z4W2 148 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 OR5AS1Q8N127 324 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 RPP25LQ8N5L8 163 aaKnown RBP2.32□□□□□ -2.04
USP48-215ENST00000534705 ZNF439Q8NDP4 499 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 OR51T1Q8NGJ9 327 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 OR5C1Q8NGR4 320 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 OR9G1Q8NH87 305 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 OR2AE1Q8NHA4 323 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 KLF14Q8TD94 323 aaPredicted RBP2.32□□□□□ -2.04
USP48-215ENST00000534705 AMELYQ99218 206 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 RASL11BQ9BPW5 248 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 PECRQ9BY49 303 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 TTTY10Q9BZA0 68 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 BPESC1Q9GZL8 116 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 TAS2R4Q9NYW5 299 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 GNG13Q9P2W3 67 aa2.32□□□□□ -2.04
USP48-215ENST00000534705 XCL2Q9UBD3 114 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms