RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PSG8Q9UQ74 426 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 HHLA3Q9XRX5 114 aa6.58□□□□□ -1.36
SSBP3-215ENST00000533946 MRPS16Q9Y3D3 137 aaKnown RBP6.58□□□□□ -1.36
SSBP3-215ENST00000533946 IGHV3-73A0A0B4J1V6 119 aa6.57□□□□□ -1.36
SSBP3-215ENST00000533946 ARPC5O15511 151 aa6.57□□□□□ -1.36
SSBP3-215ENST00000533946 CRIP1P50238 77 aa6.57□□□□□ -1.36
SSBP3-215ENST00000533946 ZNF415Q09FC8 603 aa6.57□□□□□ -1.36
SSBP3-215ENST00000533946 LYPD5Q6UWN5 251 aa6.57□□□□□ -1.36
SSBP3-215ENST00000533946 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-215ENST00000533946 PRNTQ86SH4 94 aa6.57□□□□□ -1.36
SSBP3-215ENST00000533946 IQCF2Q8IXL9 164 aa6.57□□□□□ -1.36
SSBP3-215ENST00000533946 PSMG3Q9BT73 122 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-215ENST00000533946 JPT2Q9H910 190 aa6.57□□□□□ -1.36
SSBP3-215ENST00000533946 TRBV7-9A0A0J9YWB2 115 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 PGPEP1LA6NFU8 196 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 K7EQD1 137 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 NXPH4O95158 308 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 GCGP01275 180 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 LINC00315P59091 139 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 TDRG1Q3Y452 100 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 FAM159AQ6UWV7 190 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 WFDC10BQ8IUB3 73 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 Q8N3U1 123 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 CMTM2Q8TAZ6 248 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 RASL10AQ92737 203 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 UPK3BQ9BT76 320 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 EPDR1Q9UM22 224 aa6.56□□□□□ -1.36
SSBP3-215ENST00000533946 IGKV3D-20A0A0C4DH25 116 aa6.55□□□□□ -1.36
SSBP3-215ENST00000533946 A0A1B0GV50 99 aa6.55□□□□□ -1.36
SSBP3-215ENST00000533946 C9JCJ5 164 aa6.55□□□□□ -1.36
SSBP3-215ENST00000533946 H3BNG1 76 aa6.55□□□□□ -1.36
SSBP3-215ENST00000533946 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
SSBP3-215ENST00000533946 GYPEP15421 78 aa6.55□□□□□ -1.36
SSBP3-215ENST00000533946 FAM3BP58499 235 aaPredicted RBP6.55□□□□□ -1.36
SSBP3-215ENST00000533946 RGS21Q2M5E4 152 aa6.55□□□□□ -1.36
SSBP3-215ENST00000533946 TMED6Q8WW62 240 aa6.55□□□□□ -1.36
SSBP3-215ENST00000533946 ACTR3CQ9C0K3 210 aaPredicted RBP6.55□□□□□ -1.36
SSBP3-215ENST00000533946 TRGV4A0A0C4DH28 118 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 FAM74A7A6NL05 159 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 CXorf1O96002 111 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 SERF2P84101 59 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 FLI1Q01543 452 aaPredicted RBP6.54□□□□□ -1.36
SSBP3-215ENST00000533946 SPATA12Q7Z6I5 190 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 C5orf17Q8NAS9 161 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 INO80EQ8NBZ0 244 aaPredicted RBP6.54□□□□□ -1.36
SSBP3-215ENST00000533946 SAMD10Q9BYL1 202 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 PRO0255Q9UI72 69 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 LENEPQ9Y5L5 61 aa6.54□□□□□ -1.36
SSBP3-215ENST00000533946 TRAV21A0A0B4J279 112 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 M0R2P5 195 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 CFAP126Q5VTH2 177 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 NHLRC2Q8NBF2 726 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 ASB13Q8WXK3 278 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 ZC2HC1AQ96GY0 325 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 C9orf85Q96MD7 179 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 ARL2-SNX15V9GYD0 113 aa6.53□□□□□ -1.36
SSBP3-215ENST00000533946 TRGV11A0A075B6L2 103 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 TRAV4A0A0B4J268 109 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 GRIFINA4D1Z8 144 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 MAP1LC3B2A6NCE7 125 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 C16orf90A8MZG2 172 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 SIVA1O15304 175 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 MED14OSP0DP75 135 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 GATA1P15976 413 aaPredicted RBP6.52□□□□□ -1.37
SSBP3-215ENST00000533946 CCL20P78556 96 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 ZNF506Q5JVG8 444 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 CYB561D1Q8N8Q1 229 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 SLC25A29Q8N8R3 303 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 OR4C5Q8NGB2 326 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 SPXQ9BT56 116 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 MAP1LC3BQ9GZQ8 125 aa6.52□□□□□ -1.37
SSBP3-215ENST00000533946 TMSB15BA0A087X1C1 80 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 A0A1W2PRE2 83 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 M0R036 132 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 PEX7O00628 323 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 RS1O15537 224 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 ZNF876PQ49A33 203 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 FAM74A1Q5RGS3 127 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 Q86TA4 180 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 KCNRGQ8N5I3 272 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 ARL6IP6Q8N6S5 226 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 DNAJC30Q96LL9 226 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 SDF2L1Q9HCN8 221 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 TMEM167BQ9NRX6 74 aa6.51□□□□□ -1.37
SSBP3-215ENST00000533946 BORCS7-ASMTA0A0B4J1R7 106 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 PAGE4O60829 102 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 SH2D1AO60880 128 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 IFNA7P01567 189 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 MBP02144 154 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 PFN1P07737 140 aaKnown RBP6.5□□□□□ -1.37
SSBP3-215ENST00000533946 RPL19P84098 196 aaKnown RBP6.5□□□□□ -1.37
SSBP3-215ENST00000533946 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
SSBP3-215ENST00000533946 SMUG1Q53HV7 270 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 SOHLH1Q5JUK2 328 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 DMRTA1Q5VZB9 504 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 NEGR1Q7Z3B1 354 aa6.5□□□□□ -1.37
SSBP3-215ENST00000533946 C14orf178Q8N769 122 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms