RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PFDN5Q99471 154 aa7.85□□□□□ -1.15
SVIP-205ENST00000533774 SLC25A2Q9BXI2 301 aa7.85□□□□□ -1.15
SVIP-205ENST00000533774 AAMDCQ9H7C9 122 aa7.85□□□□□ -1.15
SVIP-205ENST00000533774 SLC39A9Q9NUM3 307 aa7.85□□□□□ -1.15
SVIP-205ENST00000533774 SCGB1D2O95969 90 aa7.84□□□□□ -1.15
SVIP-205ENST00000533774 TAS2R30P59541 319 aa7.84□□□□□ -1.15
SVIP-205ENST00000533774 SPCS2Q15005 226 aa7.84□□□□□ -1.15
SVIP-205ENST00000533774 WDR83OSQ9Y284 106 aa7.84□□□□□ -1.15
SVIP-205ENST00000533774 TRAV8-1A0A0A6YYK1 113 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 C9orf170A2RU37 121 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 C5orf51A6NDU8 294 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 RPL29P47914 159 aaKnown RBP7.83□□□□□ -1.16
SVIP-205ENST00000533774 C21orf62-AS1Q17RA5 79 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 C12orf45Q8N5I9 185 aaPredicted RBP7.83□□□□□ -1.16
SVIP-205ENST00000533774 MCFD2Q8NI22 146 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 TRIM63Q969Q1 353 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 RMI2Q96E14 147 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 PHYHIPLQ96FC7 376 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 LINC01600Q96MT4 127 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 KLK12Q9UKR0 248 aa7.83□□□□□ -1.16
SVIP-205ENST00000533774 MBPP02686 304 aaPredicted RBP7.82□□□□□ -1.16
SVIP-205ENST00000533774 OR10J4P0C629 311 aa7.82□□□□□ -1.16
SVIP-205ENST00000533774 NBEAP1P0C6P0 100 aa7.82□□□□□ -1.16
SVIP-205ENST00000533774 ATRAIDQ6UW56 229 aa7.82□□□□□ -1.16
SVIP-205ENST00000533774 GPN1Q9HCN4 374 aaPredicted RBP7.82□□□□□ -1.16
SVIP-205ENST00000533774 RABL2AQ9UBK7 228 aaPredicted RBP7.82□□□□□ -1.16
SVIP-205ENST00000533774 GAGE12JA6NER3 117 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 CST7O76096 145 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 PRSS1P07477 247 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 GAGE1Q13065 139 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 GAGE4Q13068 117 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 GAGE5Q13069 117 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 RAB31Q13636 194 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 IAH1Q2TAA2 248 aaPredicted RBP7.81□□□□□ -1.16
SVIP-205ENST00000533774 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 GAGE13Q4V321 117 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 XP32Q5T750 250 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 MIR17HGQ75NE6 70 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 NIT1Q86X76 327 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 UBE2WQ96B02 151 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 FXYD5Q96DB9 178 aa7.81□□□□□ -1.16
SVIP-205ENST00000533774 SLC25A21Q9BQT8 299 aaPredicted RBP7.81□□□□□ -1.16
SVIP-205ENST00000533774 RSL24D1Q9UHA3 163 aaKnown RBP7.81□□□□□ -1.16
SVIP-205ENST00000533774 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 MUC2Q02817 5179 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 RBAKDNA6NC62 111 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 ZNF561-AS1K7EIQ3 104 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 SDIM1Q6ZPB5 146 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 C9orf163Q8N9P6 203 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 TVP23CQ96ET8 276 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 SAMD10Q9BYL1 202 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 C11orf1Q9H5F2 150 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 UQCC1Q9NVA1 299 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 GSKIPQ9P0R6 139 aa7.8□□□□□ -1.16
SVIP-205ENST00000533774 hCG_2014768A0A024R1R8 64 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 A0A0D9SG52 128 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 UBE2L5PA0A1B0GUS4 154 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 PGPEP1LA6NFU8 196 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 FAM24AA6NFZ4 105 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 USP17L23D6RBM5 183 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 FAUP35544 74 aaKnown RBP7.79□□□□□ -1.16
SVIP-205ENST00000533774 INPP1P49441 399 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 CYB561D1Q8N8Q1 229 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 CHAC2Q8WUX2 184 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 C11orf21Q9P2W6 132 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 FLVCR2Q9UPI3 526 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 LENEPQ9Y5L5 61 aa7.79□□□□□ -1.16
SVIP-205ENST00000533774 DIRC3C9JPN6 131 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 F6UZH7 168 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 MGST1P10620 155 aaKnown RBP7.78□□□□□ -1.16
SVIP-205ENST00000533774 BAXQ07812 192 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
SVIP-205ENST00000533774 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 ZNF506Q5JVG8 444 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 TOMM5Q8N4H5 51 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 DYNC2LI1Q8TCX1 351 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 C20orf85Q9H1P6 137 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 OR51M1Q9H341 326 aa7.78□□□□□ -1.16
SVIP-205ENST00000533774 LOC100996750A0A140TA64 210 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 CIDEAO60543 219 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 SMIM18P0DKX4 95 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 FGF7P21781 194 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 RANP62826 216 aaKnown RBP7.77□□□□□ -1.17
SVIP-205ENST00000533774 SRSF3P84103 164 aaKnown RBP7.77□□□□□ -1.17
SVIP-205ENST00000533774 ENHOQ6UWT2 76 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 C14orf178Q8N769 122 aaPredicted RBP7.77□□□□□ -1.17
SVIP-205ENST00000533774 C2orf50Q96LR7 162 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 KRTAP4-6Q9BYQ5 205 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 SDF2L1Q9HCN8 221 aa7.77□□□□□ -1.17
SVIP-205ENST00000533774 TRAV21A0A0B4J279 112 aa7.76□□□□□ -1.17
SVIP-205ENST00000533774 A0A0J9YXV3 536 aa7.76□□□□□ -1.17
SVIP-205ENST00000533774 FFAR4Q5NUL3 377 aa7.76□□□□□ -1.17
SVIP-205ENST00000533774 OR2T35Q8NGX2 323 aa7.76□□□□□ -1.17
SVIP-205ENST00000533774 SVIPQ8NHG7 77 aa7.76□□□□□ -1.17
SVIP-205ENST00000533774 ASB13Q8WXK3 278 aa7.76□□□□□ -1.17
SVIP-205ENST00000533774 LINC00479Q96M42 142 aa7.76□□□□□ -1.17
SVIP-205ENST00000533774 PARLQ9H300 379 aa7.76□□□□□ -1.17
SVIP-205ENST00000533774 DPH3P1Q9H4G8 78 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms