RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TRAV10A0A0B4J240 114 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 A0A0J9YX75 114 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 KNCNA6PVL3 124 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 B4DEV8 164 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 DUSP14O95147 198 aaKnown RBP8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 GDF5OSQ5U4N7 250 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 FOXI2Q6ZQN5 318 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 ISOC2Q96AB3 205 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 SMIM12Q96EX1 92 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 C8orf49Q96NF6 230 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 SAV1Q9H4B6 383 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 RPS10P5Q9NQ39 176 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 PPP1R14DQ9NXH3 145 aa8.15□□□□□ -1.1
TRAPPC4-213ENST00000533149 HSPG2P98160 4391 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 DEFB4AO15263 64 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 MT-ND4LP03901 98 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 ZNF124Q15973 351 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 ODF3L2Q3SX64 289 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 COX8CQ7Z4L0 72 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 APRG1Q8IVJ8 170 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 NDFIP1Q9BT67 221 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 HERC1Q15751 4861 aa8.14□□□□□ -1.11
TRAPPC4-213ENST00000533149 SCO1O75880 301 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 IGKV3-20P01619 116 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 CRIP1P50238 77 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 RHEBQ15382 184 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 RNF212Q495C1 297 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 SMUG1Q53HV7 270 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 ACTL10Q5JWF8 245 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 PRR27Q6MZM9 219 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 OR4B1Q8NGF8 309 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 OR10G8Q8NGN5 311 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 SFRP2Q96HF1 295 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 BIN3Q9NQY0 253 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 LENEPQ9Y5L5 61 aa8.13□□□□□ -1.11
TRAPPC4-213ENST00000533149 A0A087WWC5 75 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 H3BMM0 161 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 ERVFC1-1P60608 527 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 Q6ZR54 194 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 NUDT10Q8NFP7 164 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 DAZAP1Q96EP5 407 aaKnown RBP8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 NUDT11Q96G61 164 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 FAM19A4Q96LR4 140 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 CTDSP1Q9GZU7 261 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 RNASE7Q9H1E1 156 aaKnown RBP8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
TRAPPC4-213ENST00000533149 TRBV7-9A0A0J9YWB2 115 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 PPP1R2P9O14990 202 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 AMBPP02760 352 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 HLA-DRB4P13762 266 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 ZNF80P51504 273 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 C1orf134Q5TEV5 83 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 FAM231DQ6ZW35 169 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 ZFAND2AQ8N6M9 145 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 C15orf54Q8N8G6 183 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 ANAPC16Q96DE5 110 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 ODF3Q96PU9 254 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 HLA-DRB4X5D2U9 266 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 PKD1P98161 4303 aa8.11□□□□□ -1.11
TRAPPC4-213ENST00000533149 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 A8MTW9 85 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 FABP5P3A8MUU1 101 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 H7BYZ3 331 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 J3KRW8 73 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 GATCO43716 136 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 SH2D1AO60880 128 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 CRISP2P16562 243 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 RNASE4P34096 147 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 LEPP41159 167 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 RBMY1FQ15415 496 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 IBA57Q5T440 356 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 AMTNQ6UX39 209 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 Q6ZTC4 211 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 NDUFAF3Q9BU61 184 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 DNAH17Q9UFH2 4485 aa8.1□□□□□ -1.11
TRAPPC4-213ENST00000533149 ZNF705GA8MUZ8 300 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 CA1P00915 261 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 P01737 135 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 GPX1P07203 203 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 TSPOP30536 169 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 BTN1A1Q13410 526 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 KIR3DS1Q14943 382 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 FAM162BQ5T6X4 162 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 PRR9Q5T870 116 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 TMEM88Q6PEY1 159 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 Q8NAQ8 132 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 SMCO4Q9NRQ5 59 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 TMEM242Q9NWH2 141 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 V9GYV3 84 aa8.09□□□□□ -1.11
TRAPPC4-213ENST00000533149 IGLV2-18A0A075B6J9 118 aa8.08□□□□□ -1.12
TRAPPC4-213ENST00000533149 DEFB131BA0A096LNP1 70 aa8.08□□□□□ -1.12
TRAPPC4-213ENST00000533149 FXYD7P58549 80 aa8.08□□□□□ -1.12
TRAPPC4-213ENST00000533149 CBLN2Q8IUK8 224 aa8.08□□□□□ -1.12
TRAPPC4-213ENST00000533149 UBE2DNLQ8IWF7 75 aa8.08□□□□□ -1.12
TRAPPC4-213ENST00000533149 STHQ8IWL8 128 aa8.08□□□□□ -1.12
TRAPPC4-213ENST00000533149 OR2D3Q8NGH3 330 aa8.08□□□□□ -1.12
TRAPPC4-213ENST00000533149 CLUHP3Q96NS8 147 aa8.08□□□□□ -1.12
TRAPPC4-213ENST00000533149 TMEM189A5PLL7 270 aa8.07□□□□□ -1.12
TRAPPC4-213ENST00000533149 KLLNB2CW77 178 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms