RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 NKX2-5P52952 324 aaPredicted RBP9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 TMEM183BQ1AE95 376 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 LGALS9BQ3B8N2 356 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 FAM159AQ6UWV7 190 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 Q86TA4 180 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 ZNF575Q86XF7 245 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 TMEM183AQ8IXX5 376 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 TCEAL7Q9BRU2 100 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 NDFIP1Q9BT67 221 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 NDUFAF3Q9BU61 184 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 KRTAP17-1Q9BYP8 105 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 BOLA1Q9Y3E2 137 aa9.77□□□□□ -0.85
TSPAN4-220ENST00000532375 F5H768 121 aa9.76□□□□□ -0.85
TSPAN4-220ENST00000532375 TYMSP04818 313 aa9.76□□□□□ -0.85
TSPAN4-220ENST00000532375 SMUG1Q53HV7 270 aa9.76□□□□□ -0.85
TSPAN4-220ENST00000532375 NACAE9PAV3 2078 aa9.75□□□□□ -0.85
TSPAN4-220ENST00000532375 IGKV3D-20A0A0C4DH25 116 aa9.75□□□□□ -0.85
TSPAN4-220ENST00000532375 PFN1P07737 140 aaKnown RBP9.75□□□□□ -0.85
TSPAN4-220ENST00000532375 ZNF415Q09FC8 603 aa9.75□□□□□ -0.85
TSPAN4-220ENST00000532375 RASL10AQ92737 203 aa9.75□□□□□ -0.85
TSPAN4-220ENST00000532375 MRPL16Q9NX20 251 aaKnown RBP9.75□□□□□ -0.85
TSPAN4-220ENST00000532375 ZFP30Q9Y2G7 519 aa9.75□□□□□ -0.85
TSPAN4-220ENST00000532375 TRGV11A0A075B6L2 103 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 LTAP01374 205 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 PPT1P50897 306 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 POM121L12Q8N7R1 296 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 ZC2HC1AQ96GY0 325 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 FMC1Q96HJ9 113 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 KCNS1Q96KK3 526 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 SPXQ9BT56 116 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 NAGKQ9UJ70 344 aa9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 EPPK1P58107 5090 aaKnown RBP9.74□□□□□ -0.85
TSPAN4-220ENST00000532375 C11orf52Q96A22 123 aa9.73□□□□□ -0.85
TSPAN4-220ENST00000532375 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
TSPAN4-220ENST00000532375 GNG13Q9P2W3 67 aa9.73□□□□□ -0.85
TSPAN4-220ENST00000532375 DNAH2Q9P225 4427 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 FABP5P3A8MUU1 101 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 RNASE3P12724 160 aaKnown RBP9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 ZNF674Q2M3X9 581 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 ALKAL2Q6UX46 152 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 C15orf53Q8NAA6 179 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 LYPD6BQ8NI32 183 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 VSIG2Q96IQ7 327 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 C9orf85Q96MD7 179 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 SDF2L1Q9HCN8 221 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 MANBALQ9NQG1 85 aa9.72□□□□□ -0.85
TSPAN4-220ENST00000532375 BIRC6Q9NR09 4857 aa9.71□□□□□ -0.85
TSPAN4-220ENST00000532375 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.86
TSPAN4-220ENST00000532375 TRAV26-1A0A087WT03 109 aa9.71□□□□□ -0.86
TSPAN4-220ENST00000532375 AKR1C3P42330 323 aa9.71□□□□□ -0.86
TSPAN4-220ENST00000532375 OR5I1Q13606 314 aa9.71□□□□□ -0.86
TSPAN4-220ENST00000532375 FHL2Q14192 279 aa9.71□□□□□ -0.86
TSPAN4-220ENST00000532375 H3BNG1 76 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 M0R2P5 195 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 SH2D1AO60880 128 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 P0DMU3 169 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 FAM231AP0DMU4 169 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 FAM231CP0DMU5 169 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 UBE2G1P62253 170 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 TXNDC17Q9BRA2 123 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
TSPAN4-220ENST00000532375 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 TEX46H3BTG2 121 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 IGLV2-8P01709 118 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 RNF212Q495C1 297 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 DNLZQ5SXM8 178 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 NHLRC2Q8NBF2 726 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 PTH2Q96A98 100 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 ZNF479Q96JC4 524 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 DNAH17Q9UFH2 4485 aa9.69□□□□□ -0.86
TSPAN4-220ENST00000532375 A0A0J9YY99 117 aa9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 PGPEP1LA6NFU8 196 aa9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 IGHV3-53P01767 116 aa9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 SFTA3P0C7M3 94 aa9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 BCL2P10415 239 aa9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 RPL35P42766 123 aaKnown RBP9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 MEF2BQ02080 365 aaPredicted RBP9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 FAM162BQ5T6X4 162 aa9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 BAGE2Q86Y30 109 aa9.68□□□□□ -0.86
TSPAN4-220ENST00000532375 A0A096LPF7 62 aa9.67□□□□□ -0.86
TSPAN4-220ENST00000532375 NUDT3O95989 172 aa9.67□□□□□ -0.86
TSPAN4-220ENST00000532375 CRYBA4P53673 196 aa9.67□□□□□ -0.86
TSPAN4-220ENST00000532375 BLOC1S1P78537 153 aa9.67□□□□□ -0.86
TSPAN4-220ENST00000532375 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
TSPAN4-220ENST00000532375 TRBV20OR9-2A0A075B6H5 130 aa9.66□□□□□ -0.86
TSPAN4-220ENST00000532375 TRAV4A0A0B4J268 109 aa9.66□□□□□ -0.86
TSPAN4-220ENST00000532375 ORM1P02763 201 aa9.66□□□□□ -0.86
TSPAN4-220ENST00000532375 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
TSPAN4-220ENST00000532375 SCRT2Q9NQ03 307 aa9.66□□□□□ -0.86
TSPAN4-220ENST00000532375 IL36BQ9NZH7 164 aa9.66□□□□□ -0.86
TSPAN4-220ENST00000532375 PRO0255Q9UI72 69 aa9.66□□□□□ -0.86
TSPAN4-220ENST00000532375 VAX2Q9UIW0 290 aa9.66□□□□□ -0.86
TSPAN4-220ENST00000532375 LINC00588Q9Y4M8 146 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms