RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TVP23CQ96ET8 276 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 LY96Q9Y6Y9 160 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 TRAV8-1A0A0A6YYK1 113 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 TRAV21A0A0B4J279 112 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 IGHV3-16A0A0C4DH30 117 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 M0R2P5 195 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 EREGO14944 169 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 ERVFC1-1P60608 527 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 WFDC10BQ8IUB3 73 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 OR4C5Q8NGB2 326 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 TREM1Q9NP99 234 aa10.72□□□□□ -0.69
CPSF1-205ENST00000531042 F6UZH7 168 aa10.71□□□□□ -0.69
CPSF1-205ENST00000531042 K7EP13 123 aa10.71□□□□□ -0.69
CPSF1-205ENST00000531042 HMGB3O15347 200 aaKnown RBP10.71□□□□□ -0.69
CPSF1-205ENST00000531042 TYMSP04818 313 aa10.71□□□□□ -0.69
CPSF1-205ENST00000531042 GNG5P63218 68 aa10.71□□□□□ -0.69
CPSF1-205ENST00000531042 TXNDC17Q9BRA2 123 aa10.71□□□□□ -0.69
CPSF1-205ENST00000531042 MED28Q9H204 178 aa10.71□□□□□ -0.69
CPSF1-205ENST00000531042 C9JCJ5 164 aa10.7□□□□□ -0.7
CPSF1-205ENST00000531042 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
CPSF1-205ENST00000531042 ZFP69Q49AA0 526 aa10.7□□□□□ -0.7
CPSF1-205ENST00000531042 KCNS1Q96KK3 526 aa10.7□□□□□ -0.7
CPSF1-205ENST00000531042 SDF2L1Q9HCN8 221 aa10.7□□□□□ -0.7
CPSF1-205ENST00000531042 LOC100131303A0A0U1RQF7 123 aa10.69□□□□□ -0.7
CPSF1-205ENST00000531042 DNAH10OSP0CZ25 163 aa10.69□□□□□ -0.7
CPSF1-205ENST00000531042 ARL14EPLP0DKL9 152 aa10.69□□□□□ -0.7
CPSF1-205ENST00000531042 EVI2AP22794 236 aa10.69□□□□□ -0.7
CPSF1-205ENST00000531042 CDC34P49427 236 aaPredicted RBP10.69□□□□□ -0.7
CPSF1-205ENST00000531042 CDPF1Q6NVV7 123 aa10.69□□□□□ -0.7
CPSF1-205ENST00000531042 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
CPSF1-205ENST00000531042 A0A087WTM6 91 aa10.68□□□□□ -0.7
CPSF1-205ENST00000531042 STAG3L2P0CL84 134 aa10.68□□□□□ -0.7
CPSF1-205ENST00000531042 STAG3L3P0CL85 134 aa10.68□□□□□ -0.7
CPSF1-205ENST00000531042 OR2G3Q8NGZ4 309 aa10.68□□□□□ -0.7
CPSF1-205ENST00000531042 ASB13Q8WXK3 278 aa10.68□□□□□ -0.7
CPSF1-205ENST00000531042 SGK494Q96LW2 274 aa10.68□□□□□ -0.7
CPSF1-205ENST00000531042 SERTM2A0A1B0GWG4 89 aa10.67□□□□□ -0.7
CPSF1-205ENST00000531042 C1QBP02746 253 aa10.67□□□□□ -0.7
CPSF1-205ENST00000531042 GATA1P15976 413 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-205ENST00000531042 SH2D6Q7Z4S9 175 aa10.67□□□□□ -0.7
CPSF1-205ENST00000531042 HSD17B11Q8NBQ5 300 aa10.67□□□□□ -0.7
CPSF1-205ENST00000531042 SUN5Q8TC36 379 aa10.67□□□□□ -0.7
CPSF1-205ENST00000531042 NDFIP1Q9BT67 221 aa10.67□□□□□ -0.7
CPSF1-205ENST00000531042 TCRAP04437 139 aa10.66□□□□□ -0.7
CPSF1-205ENST00000531042 ZNF80P51504 273 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-205ENST00000531042 C5orf17Q8NAS9 161 aa10.66□□□□□ -0.7
CPSF1-205ENST00000531042 RAB24Q969Q5 203 aa10.66□□□□□ -0.7
CPSF1-205ENST00000531042 PSMG3Q9BT73 122 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-205ENST00000531042 C11orf21Q9P2W6 132 aa10.66□□□□□ -0.7
CPSF1-205ENST00000531042 FBLL1A6NHQ2 334 aaKnown RBP10.65□□□□□ -0.7
CPSF1-205ENST00000531042 CRYGDP07320 174 aa10.65□□□□□ -0.7
CPSF1-205ENST00000531042 ATP6V0CP27449 155 aa10.65□□□□□ -0.7
CPSF1-205ENST00000531042 GCHFRP30047 84 aa10.65□□□□□ -0.7
CPSF1-205ENST00000531042 TIRAPP58753 221 aa10.65□□□□□ -0.7
CPSF1-205ENST00000531042 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
CPSF1-205ENST00000531042 NHLRC2Q8NBF2 726 aa10.65□□□□□ -0.7
CPSF1-205ENST00000531042 AQP10Q96PS8 301 aa10.65□□□□□ -0.7
CPSF1-205ENST00000531042 K7EQM0 130 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 TAAR5O14804 337 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 GCGP01275 180 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 IGLV2-11P01706 119 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 MBP02144 154 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 XGP55808 180 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 SERF2P84101 59 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 ZNF876PQ49A33 203 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 CFAP126Q5VTH2 177 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 SLC25A29Q8N8R3 303 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 PSG8Q9UQ74 426 aa10.64□□□□□ -0.71
CPSF1-205ENST00000531042 IGHV3-38A0A0C4DH36 116 aa10.63□□□□□ -0.71
CPSF1-205ENST00000531042 RS1O15537 224 aa10.63□□□□□ -0.71
CPSF1-205ENST00000531042 CIDEAO60543 219 aa10.63□□□□□ -0.71
CPSF1-205ENST00000531042 PFN1P07737 140 aaKnown RBP10.63□□□□□ -0.71
CPSF1-205ENST00000531042 PPT1P50897 306 aa10.63□□□□□ -0.71
CPSF1-205ENST00000531042 SUMO1P63165 101 aaKnown RBP10.63□□□□□ -0.71
CPSF1-205ENST00000531042 DPPA3Q6W0C5 159 aa10.63□□□□□ -0.71
CPSF1-205ENST00000531042 C9orf85Q96MD7 179 aa10.63□□□□□ -0.71
CPSF1-205ENST00000531042 EPDR1Q9UM22 224 aa10.63□□□□□ -0.71
CPSF1-205ENST00000531042 TRBV6-4A0A1B0GX49 114 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 EPM2AB3EWF7 344 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 GGTLC3B5MD39 225 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 CXorf1O96002 111 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 GIPP09681 153 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-205ENST00000531042 NKX2-5P52952 324 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-205ENST00000531042 KRTAP10-1P60331 282 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-205ENST00000531042 SMUG1Q53HV7 270 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 LINC01556Q5JQF7 62 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 TMEM75Q8N9X5 138 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 PTH2Q96A98 100 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 PRADC1Q9BSG0 188 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 SH3BGRL3Q9H299 93 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 TMEM167BQ9NRX6 74 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 TNFSF18Q9UNG2 199 aa10.62□□□□□ -0.71
CPSF1-205ENST00000531042 IGHV3-73A0A0B4J1V6 119 aa10.61□□□□□ -0.71
CPSF1-205ENST00000531042 PGPEP1LA6NFU8 196 aa10.61□□□□□ -0.71
CPSF1-205ENST00000531042 RHOHQ15669 191 aa10.61□□□□□ -0.71
CPSF1-205ENST00000531042 Q5BKY6 102 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms