RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.57
BRK1-201ENST00000530758 C11orf45Q8TAV5 145 aa11.46□□□□□ -0.57
BRK1-201ENST00000530758 PARLQ9H300 379 aa11.46□□□□□ -0.57
BRK1-201ENST00000530758 GNG4P50150 75 aa11.45□□□□□ -0.58
BRK1-201ENST00000530758 MUC21Q5SSG8 566 aa11.45□□□□□ -0.58
BRK1-201ENST00000530758 ZNF575Q86XF7 245 aa11.45□□□□□ -0.58
BRK1-201ENST00000530758 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
BRK1-201ENST00000530758 TIMM8BQ9Y5J9 83 aaPredicted RBP11.45□□□□□ -0.58
BRK1-201ENST00000530758 TRGV11A0A075B6L2 103 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 SH2D1AO60880 128 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 TCL1AP56279 114 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 SRSF3P84103 164 aaKnown RBP11.44□□□□□ -0.58
BRK1-201ENST00000530758 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 FAM222AQ5U5X8 452 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 LINC00612Q8N6U2 182 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 NHLRC2Q8NBF2 726 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 SDF2L1Q9HCN8 221 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 LY96Q9Y6Y9 160 aa11.44□□□□□ -0.58
BRK1-201ENST00000530758 IGHV3-16A0A0C4DH30 117 aa11.43□□□□□ -0.58
BRK1-201ENST00000530758 C9JQL5 133 aa11.43□□□□□ -0.58
BRK1-201ENST00000530758 GNRH2O43555 120 aa11.43□□□□□ -0.58
BRK1-201ENST00000530758 TYMSP04818 313 aa11.43□□□□□ -0.58
BRK1-201ENST00000530758 EMP1P54849 157 aa11.43□□□□□ -0.58
BRK1-201ENST00000530758 C12orf74Q32Q52 190 aa11.43□□□□□ -0.58
BRK1-201ENST00000530758 LINC01559Q495D7 138 aa11.43□□□□□ -0.58
BRK1-201ENST00000530758 SNURFLB1AK76 121 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 KRBOX1C9JBD0 128 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 SPINK4O60575 86 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 LGALS9BQ3B8N2 356 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 FAM74A3Q4VXF1 159 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 OCC1Q8TAD7 63 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 MUC7Q8TAX7 377 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 SPXQ9BT56 116 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
BRK1-201ENST00000530758 BIN3Q9NQY0 253 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 GSN-AS1Q9NRJ2 163 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
BRK1-201ENST00000530758 RYR2Q92736 4967 aa11.41□□□□□ -0.58
BRK1-201ENST00000530758 C19orf71A6NCJ1 209 aa11.41□□□□□ -0.58
BRK1-201ENST00000530758 NANOS2P60321 138 aaKnown RBP11.41□□□□□ -0.58
BRK1-201ENST00000530758 ZNF415Q09FC8 603 aa11.41□□□□□ -0.58
BRK1-201ENST00000530758 C18orf15Q96N68 181 aa11.41□□□□□ -0.58
BRK1-201ENST00000530758 NAGKQ9UJ70 344 aa11.41□□□□□ -0.58
BRK1-201ENST00000530758 PGPEP1LA6NFU8 196 aa11.4□□□□□ -0.58
BRK1-201ENST00000530758 C3orf84H3BNL1 204 aa11.4□□□□□ -0.58
BRK1-201ENST00000530758 ORM1P02763 201 aa11.4□□□□□ -0.58
BRK1-201ENST00000530758 CXCL1P09341 107 aa11.4□□□□□ -0.58
BRK1-201ENST00000530758 PTH2Q96A98 100 aa11.4□□□□□ -0.58
BRK1-201ENST00000530758 MUC4Q99102 2169 aa11.4□□□□□ -0.59
BRK1-201ENST00000530758 ZNF727A8MUV8 499 aa11.39□□□□□ -0.59
BRK1-201ENST00000530758 B4DEV8 164 aa11.39□□□□□ -0.59
BRK1-201ENST00000530758 RNASE3P12724 160 aaKnown RBP11.39□□□□□ -0.59
BRK1-201ENST00000530758 RASL10AQ92737 203 aa11.39□□□□□ -0.59
BRK1-201ENST00000530758 C9orf85Q96MD7 179 aa11.39□□□□□ -0.59
BRK1-201ENST00000530758 SMIM7Q9BQ49 75 aa11.39□□□□□ -0.59
BRK1-201ENST00000530758 K7EN84 100 aa11.38□□□□□ -0.59
BRK1-201ENST00000530758 IL36BQ9NZH7 164 aa11.38□□□□□ -0.59
BRK1-201ENST00000530758 LYSTQ99698 3801 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 MGST1P10620 155 aaKnown RBP11.37□□□□□ -0.59
BRK1-201ENST00000530758 CEBPGP53567 150 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 DAD1P61803 113 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 CASC10Q5T4H9 136 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 PRR27Q6MZM9 219 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 UQCC3Q6UW78 93 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 Q6ZTC4 211 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 LINC01551Q86U37 167 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
BRK1-201ENST00000530758 LINC00862A6NCI5 91 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 M0R036 132 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 M0R2P5 195 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 OR5I1Q13606 314 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 TMEM241Q24JQ0 296 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 SOHLH1Q5JUK2 328 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 PIK3CD-AS1Q5SR53 167 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 Q6ZTI0 123 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 FAM231DQ6ZW35 169 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 NUDT10Q8NFP7 164 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 PHLDA1Q8WV24 401 aaPredicted RBP11.36□□□□□ -0.59
BRK1-201ENST00000530758 DAZAP1Q96EP5 407 aaKnown RBP11.36□□□□□ -0.59
BRK1-201ENST00000530758 NUDT11Q96G61 164 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
BRK1-201ENST00000530758 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 TENM2Q9NT68 2774 aa11.36□□□□□ -0.59
BRK1-201ENST00000530758 TRAV10A0A0B4J240 114 aa11.35□□□□□ -0.59
BRK1-201ENST00000530758 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
BRK1-201ENST00000530758 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
BRK1-201ENST00000530758 MED14OSP0DP75 135 aa11.35□□□□□ -0.59
BRK1-201ENST00000530758 ASIPP42127 132 aa11.35□□□□□ -0.59
BRK1-201ENST00000530758 CEMP1Q6PRD7 247 aaPredicted RBP11.35□□□□□ -0.59
BRK1-201ENST00000530758 TRGV1A0A0A0MS02 117 aa11.34□□□□□ -0.59
BRK1-201ENST00000530758 P01737 135 aa11.34□□□□□ -0.59
BRK1-201ENST00000530758 ARMS2P0C7Q2 107 aa11.34□□□□□ -0.59
BRK1-201ENST00000530758 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
BRK1-201ENST00000530758 RPL19P84098 196 aaKnown RBP11.34□□□□□ -0.59
BRK1-201ENST00000530758 NAT8Q9UHE5 227 aa11.34□□□□□ -0.59
BRK1-201ENST00000530758 GAGE12BA1L429 117 aa11.33□□□□□ -0.6
BRK1-201ENST00000530758 GRIFINA4D1Z8 144 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms