RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 FABP5P3A8MUU1 101 aa15.18■□□□□ 0.02
CAPN1-220ENST00000530567 TYMSP04818 313 aa15.18■□□□□ 0.02
CAPN1-220ENST00000530567 TCL1AP56279 114 aa15.18■□□□□ 0.02
CAPN1-220ENST00000530567 FAM162BQ5T6X4 162 aa15.18■□□□□ 0.02
CAPN1-220ENST00000530567 PARLQ9H300 379 aa15.18■□□□□ 0.02
CAPN1-220ENST00000530567 MDFICQ9P1T7 246 aa15.18■□□□□ 0.02
CAPN1-220ENST00000530567 CSMD3Q7Z407 3707 aa15.18■□□□□ 0.02
CAPN1-220ENST00000530567 IGKV3D-20A0A0C4DH25 116 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 TEX48A0A1B0GUV7 120 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 GNRH2O43555 120 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 SRP19P09132 144 aaKnown RBP15.17■□□□□ 0.02
CAPN1-220ENST00000530567 SRSF3P84103 164 aaKnown RBP15.17■□□□□ 0.02
CAPN1-220ENST00000530567 DAZ2Q13117 558 aaKnown RBP15.17■□□□□ 0.02
CAPN1-220ENST00000530567 CLLU1Q5K131 121 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 Q6ZTC4 211 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 TRGV11A0A075B6L2 103 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 IGHV3-16A0A0C4DH30 117 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 C9JQL5 133 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 GNG4P50150 75 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 RAB14P61106 215 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 LINC00612Q8N6U2 182 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 KCNS1Q96KK3 526 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 SDF2L1Q9HCN8 221 aa15.17■□□□□ 0.02
CAPN1-220ENST00000530567 PGPEP1LA6NFU8 196 aa15.16■□□□□ 0.02
CAPN1-220ENST00000530567 SNURFLB1AK76 121 aa15.16■□□□□ 0.02
CAPN1-220ENST00000530567 ZNF415Q09FC8 603 aa15.16■□□□□ 0.02
CAPN1-220ENST00000530567 SMIM12Q96EX1 92 aa15.16■□□□□ 0.02
CAPN1-220ENST00000530567 STARD9Q9P2P6 4700 aa15.15■□□□□ 0.02
CAPN1-220ENST00000530567 C9JCJ5 164 aa15.15■□□□□ 0.02
CAPN1-220ENST00000530567 ZFAND6Q6FIF0 208 aa15.15■□□□□ 0.02
CAPN1-220ENST00000530567 ZNF575Q86XF7 245 aa15.15■□□□□ 0.02
CAPN1-220ENST00000530567 C3orf84H3BNL1 204 aa15.14■□□□□ 0.01
CAPN1-220ENST00000530567 KRBOX1C9JBD0 128 aa15.13■□□□□ 0.01
CAPN1-220ENST00000530567 SPINK4O60575 86 aa15.13■□□□□ 0.01
CAPN1-220ENST00000530567 CEBPGP53567 150 aa15.13■□□□□ 0.01
CAPN1-220ENST00000530567 LINC01559Q495D7 138 aa15.13■□□□□ 0.01
CAPN1-220ENST00000530567 PRR27Q6MZM9 219 aa15.13■□□□□ 0.01
CAPN1-220ENST00000530567 Q6ZTI0 123 aa15.13■□□□□ 0.01
CAPN1-220ENST00000530567 PHLDA1Q8WV24 401 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-220ENST00000530567 M0R036 132 aa15.12■□□□□ 0.01
CAPN1-220ENST00000530567 ORM1P02763 201 aa15.12■□□□□ 0.01
CAPN1-220ENST00000530567 DEFB130BP0DP73 79 aa15.12■□□□□ 0.01
CAPN1-220ENST00000530567 DEFB130AP0DP74 79 aa15.12■□□□□ 0.01
CAPN1-220ENST00000530567 DAD1P61803 113 aa15.12■□□□□ 0.01
CAPN1-220ENST00000530567 DYNC2H1Q8NCM8 4307 aaKnown RBP15.12■□□□□ 0.01
CAPN1-220ENST00000530567 B4DEV8 164 aa15.11■□□□□ 0.01
CAPN1-220ENST00000530567 MGST1P10620 155 aaKnown RBP15.11■□□□□ 0.01
CAPN1-220ENST00000530567 PEA15Q15121 130 aa15.11■□□□□ 0.01
CAPN1-220ENST00000530567 CASC10Q5T4H9 136 aa15.11■□□□□ 0.01
CAPN1-220ENST00000530567 K7EN84 100 aa15.1■□□□□ 0.01
CAPN1-220ENST00000530567 RNASE3P12724 160 aaKnown RBP15.1■□□□□ 0.01
CAPN1-220ENST00000530567 C9orf85Q96MD7 179 aa15.1■□□□□ 0.01
CAPN1-220ENST00000530567 SMDT1Q9H4I9 107 aa15.1■□□□□ 0.01
CAPN1-220ENST00000530567 GAGE12BA1L429 117 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 C19orf71A6NCJ1 209 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 GAGE7O76087 117 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 GAGE12FP0CL80 117 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 GAGE12GP0CL81 117 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 GAGE12IP0CL82 117 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 RPL19P84098 196 aaKnown RBP15.09■□□□□ 0.01
CAPN1-220ENST00000530567 CEMP1Q6PRD7 247 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-220ENST00000530567 OCC1Q8TAD7 63 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 SMIM7Q9BQ49 75 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 SPXQ9BT56 116 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 MRPL16Q9NX20 251 aaKnown RBP15.09■□□□□ 0.01
CAPN1-220ENST00000530567 TRGV1A0A0A0MS02 117 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 TRAV10A0A0B4J240 114 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 OR5I1Q13606 314 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 LGALS9BQ3B8N2 356 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 DNLZQ5SXM8 178 aa15.09■□□□□ 0.01
CAPN1-220ENST00000530567 MUC4Q99102 2169 aa15.08■□□□□ 0
CAPN1-220ENST00000530567 TMSB15BA0A087X1C1 80 aa15.08■□□□□ 0
CAPN1-220ENST00000530567 NUPR2A6NF83 97 aa15.08■□□□□ 0
CAPN1-220ENST00000530567 GRIFINA4D1Z8 144 aa15.07■□□□□ 0
CAPN1-220ENST00000530567 ZNF727A8MUV8 499 aa15.07■□□□□ 0
CAPN1-220ENST00000530567 ASIPP42127 132 aa15.07■□□□□ 0
CAPN1-220ENST00000530567 C18orf15Q96N68 181 aa15.07■□□□□ 0
CAPN1-220ENST00000530567 DEFB131BA0A096LNP1 70 aa15.06■□□□□ 0
CAPN1-220ENST00000530567 M0R2P5 195 aa15.06■□□□□ 0
CAPN1-220ENST00000530567 RASL10AQ92737 203 aa15.06■□□□□ 0
CAPN1-220ENST00000530567 LY96Q9Y6Y9 160 aa15.06■□□□□ 0
CAPN1-220ENST00000530567 BIN3Q9NQY0 253 aa15.05■□□□□ -0
CAPN1-220ENST00000530567 IL36BQ9NZH7 164 aa15.05■□□□□ -0
CAPN1-220ENST00000530567 H3BVH4 76 aa15.04■□□□□ -0
CAPN1-220ENST00000530567 CXCL1P09341 107 aa15.04■□□□□ -0
CAPN1-220ENST00000530567 HTN3P15516 51 aa15.04■□□□□ -0
CAPN1-220ENST00000530567 S100A4P26447 101 aaKnown RBP15.04■□□□□ -0
CAPN1-220ENST00000530567 LINC01551Q86U37 167 aa15.04■□□□□ -0
CAPN1-220ENST00000530567 ATP5G1P05496 136 aa15.03■□□□□ -0
CAPN1-220ENST00000530567 FAM74A3Q4VXF1 159 aa15.03■□□□□ -0
CAPN1-220ENST00000530567 DAZAP1Q96EP5 407 aaKnown RBP15.03■□□□□ -0
CAPN1-220ENST00000530567 SCRT2Q9NQ03 307 aa15.03■□□□□ -0
CAPN1-220ENST00000530567 TENM2Q9NT68 2774 aa15.03■□□□□ -0
CAPN1-220ENST00000530567 TRGV2A0A075B6R0 118 aa15.02■□□□□ -0
CAPN1-220ENST00000530567 ARMS2P0C7Q2 107 aa15.02■□□□□ -0
CAPN1-220ENST00000530567 NUDT10Q8NFP7 164 aa15.02■□□□□ -0
CAPN1-220ENST00000530567 PTH2Q96A98 100 aa15.02■□□□□ -0
CAPN1-220ENST00000530567 NUDT11Q96G61 164 aa15.02■□□□□ -0
CAPN1-220ENST00000530567 RNASE7Q9H1E1 156 aaKnown RBP15.02■□□□□ -0
CAPN1-220ENST00000530567 P01737 135 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms