RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TMEM256Q8N2U0 113 aa3.47□□□□□ -1.85
AMBRA1-209ENST00000529963 LINC00612Q8N6U2 182 aa3.47□□□□□ -1.85
AMBRA1-209ENST00000529963 ZNF738Q8NE65 137 aa3.47□□□□□ -1.85
AMBRA1-209ENST00000529963 DIRAS2Q96HU8 199 aa3.47□□□□□ -1.85
AMBRA1-209ENST00000529963 MIXL1Q9H2W2 232 aa3.47□□□□□ -1.85
AMBRA1-209ENST00000529963 TRAV12-2A0A075B6T6 113 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 IGKV1OR2-108A0A075B7D4 117 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 CRXO43186 299 aaPredicted RBP3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 PITX3O75364 302 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 ADAP1O75689 374 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 SLC25A6P12236 298 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 RPL7P18124 248 aaKnown RBP3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 FAUP35544 74 aaKnown RBP3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 TAS2R60P59551 318 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 RHOBP62745 196 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 HIST1H1AQ02539 215 aaPredicted RBP3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 C2orf66Q6UXQ4 117 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 SSX7Q7RTT5 188 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 SPATA12Q7Z6I5 190 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 RNF182Q8N6D2 247 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 OR10J6PQ8NGY7 276 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 C16orf74Q96GX8 76 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 LINC01587Q99440 93 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 LINC00588Q9Y4M8 146 aa3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 TIMM8BQ9Y5J9 83 aaPredicted RBP3.46□□□□□ -1.86
AMBRA1-209ENST00000529963 TRAV8-2A0A0B4J237 113 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 PLAC8L1A1L4L8 177 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 FABP12A6NFH5 140 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 H3BRN7 92 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 SYNGR2O43760 224 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 PRM2P04554 102 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 IL5P05113 134 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 HTN1P15515 57 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 AZU1P20160 251 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 AP3S2P59780 193 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 MRPL23Q16540 153 aaKnown RBP3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 PYDC2Q56P42 97 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 TMEM128Q5BJH2 165 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 SPANXN5Q5MJ07 72 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 ZNF493Q6ZR52 646 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 ACOT7LQ6ZUV0 252 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 TMEM144Q7Z5S9 345 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 TMED4Q7Z7H5 227 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 OR8A1Q8NGG7 326 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 LRRC20Q8TCA0 184 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 SHANK2-AS3Q9BTD1 123 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 SLC25A39Q9BZJ4 359 aaPredicted RBP3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 NOP10Q9NPE3 64 aaKnown RBP3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 HIGD1AQ9Y241 93 aa3.45□□□□□ -1.86
AMBRA1-209ENST00000529963 LINC00854A0A1B0GVQ3 168 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 H3BP45 60 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 H7BYZ3 331 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 HYPMO75409 117 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 S100A9P06702 114 aaKnown RBP3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 OR5G3P0C626 314 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 LINC00869P0C866 280 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 CXCL3P19876 107 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 M6PRP20645 277 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 SELENOTP62341 195 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 PSG3Q16557 428 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 CYP2G1PQ6ZSU1 146 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 RXFP4Q8TDU9 374 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 TMEM263Q8WUH6 116 aaKnown RBP3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 GNPNAT1Q96EK6 184 aaPredicted RBP3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 C20orf144Q9BQM9 153 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 SLC25A21Q9BQT8 299 aaPredicted RBP3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 Q9H3A6 140 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 GOSR2O14653 212 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 SFT2D2O95562 160 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 RLN2P04090 185 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 CXCL2P19875 107 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 INPP1P49441 399 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 ASAH1Q13510 395 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 ZNF846Q147U1 533 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 TOMM5Q8N4H5 51 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 S100ZQ8WXG8 99 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 RPUSD4Q96CM3 377 aaKnown RBP3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 PGLYRP4Q96LB8 373 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 SLC50A1Q9BRV3 221 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 UPK3BQ9BT76 320 aa3.44□□□□□ -1.86
AMBRA1-209ENST00000529963 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 A0A0J9YY99 117 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 FNDC10F2Z333 226 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 H3BNG1 76 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 POLR2GP62487 172 aaKnown RBP eCLIP3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 PPP1R1AQ13522 171 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 Q1RN00 199 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 TRIQKQ629K1 86 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 LCN15Q6UWW0 184 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 DEDD2Q8WXF8 326 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 ATP5SQ99766 215 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 ARL6Q9H0F7 186 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 ARV1Q9H2C2 271 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 NPVFQ9HCQ7 196 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 ZNF331Q9NQX6 463 aaPredicted RBP3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 ZNF586Q9NXT0 402 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 PSENENQ9NZ42 101 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 MRPS16Q9Y3D3 137 aaKnown RBP3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 V9GYH0 126 aa3.43□□□□□ -1.86
AMBRA1-209ENST00000529963 K7EPK0 472 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms