RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 C1QTNF4Q9BXJ3 329 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 WFDC1Q9HC57 220 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 RPRMQ9NS64 109 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 GOLT1BQ9Y3E0 138 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 UBE2L5PA0A1B0GUS4 154 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 LOC102723971A0A1B0GUV8 181 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF705FA8MVS1 300 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-212ENST00000528930 PFN1P07737 140 aaKnown RBP6.06□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF705DP0CH99 300 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF705BP0CI00 300 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-212ENST00000528930 FABP4P15090 132 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 HLA-DMBP28068 263 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 RPL29P47914 159 aaKnown RBP6.06□□□□□ -1.44
SSBP3-212ENST00000528930 HBG1P69891 147 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 HBG2P69892 147 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 PSG9Q00887 426 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 RAB31Q13636 194 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 EBLN2Q6P2I7 272 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 AMTNQ6UX39 209 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 S100A7AQ86SG5 101 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 RNF182Q8N6D2 247 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 OR4B1Q8NGF8 309 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 PHLDA1Q8WV24 401 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-212ENST00000528930 C8orf49Q96NF6 230 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 C20orf144Q9BQM9 153 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 SDF2L1Q9HCN8 221 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 DNAJC4Q9NNZ3 241 aa6.06□□□□□ -1.44
SSBP3-212ENST00000528930 TRAV5A0A0B4J249 113 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 COX7A2P2O60397 106 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 MBP02144 154 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 AMBPP02760 352 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 SNRPCP09234 159 aaKnown RBP6.05□□□□□ -1.44
SSBP3-212ENST00000528930 CNN1P51911 297 aaKnown RBP6.05□□□□□ -1.44
SSBP3-212ENST00000528930 TCTAP57738 103 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 SERF2P84101 59 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 PSG3Q16557 428 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 SAPCD1Q5SSQ6 148 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 C10orf113Q5VZT2 155 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 BPIFA4PQ86YQ2 179 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 C1orf158Q8N1D5 194 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 OR5C1Q8NGR4 320 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 OR2G3Q8NGZ4 309 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 ANAPC16Q96DE5 110 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 PSMG3Q9BT73 122 aaPredicted RBP6.05□□□□□ -1.44
SSBP3-212ENST00000528930 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 SLC39A9Q9NUM3 307 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 RNF24Q9Y225 148 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
SSBP3-212ENST00000528930 TGIF2-C20orf24A0A0A6YYL0 155 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 TMEM250H0YL14 139 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 CRXO43186 299 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-212ENST00000528930 MPDU1O75352 247 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 IFNA1P01562 189 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 IGLC2P0DOY2 106 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 PRB4P10163 310 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-212ENST00000528930 ESDP10768 282 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 ATP6V0CP27449 155 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 LCN15Q6UWW0 184 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 OR1L4Q8NGR5 311 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 FAM213BQ8TBF2 198 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF503Q96F45 646 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 SNHG12Q9BXW3 62 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 NPCDR1Q9BY65 106 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF331Q9NQX6 463 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-212ENST00000528930 CELA1Q9UNI1 258 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 PXMP4Q9Y6I8 212 aa6.04□□□□□ -1.44
SSBP3-212ENST00000528930 TRAV9-1A0A075B6T8 112 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 SMIM9A6NGZ8 99 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 H3BTX0 84 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 SLC17A3O00476 420 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 DUSP14O95147 198 aaKnown RBP6.03□□□□□ -1.44
SSBP3-212ENST00000528930 BCL2P10415 239 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 RPS20P60866 119 aaKnown RBP6.03□□□□□ -1.44
SSBP3-212ENST00000528930 GCSAMLQ5JQS6 135 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF738Q8NE65 137 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 OR8A1Q8NGG7 326 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 OR2D3Q8NGH3 330 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 IGF2BP2-AS1Q96M15 143 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 SLC50A1Q9BRV3 221 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 TMEM208Q9BTX3 173 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 WDR61Q9GZS3 305 aaKnown RBP6.03□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF586Q9NXT0 402 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 NAT8Q9UHE5 227 aa6.03□□□□□ -1.44
SSBP3-212ENST00000528930 IGHV3OR16-12A0A075B7B8 117 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 A0A1W2PPQ1 181 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 ZNF727A8MUV8 499 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 C11orf94C9JXX5 98 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 PRAC2D3DTV9 90 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 M0R2Z0 102 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 CCL20P78556 96 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 HIST1H1AQ02539 215 aaPredicted RBP6.02□□□□□ -1.45
SSBP3-212ENST00000528930 SPINK13Q1W4C9 94 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 C12orf74Q32Q52 190 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 GFI1BQ5VTD9 330 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 Q6ZTC4 211 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 CYB561D1Q8N8Q1 229 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 RPUSD4Q96CM3 377 aaKnown RBP6.02□□□□□ -1.45
SSBP3-212ENST00000528930 MIEN1Q9BRT3 115 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 PRO1933Q9H354 126 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 TMEM14CQ9P0S9 112 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms