RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SPXQ9BT56 116 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 TNFSF18Q9UNG2 199 aa7.14□□□□□ -1.27
PRPF40B-204ENST00000527253 FXYD6-FXYD2A0A087WZ82 144 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 TRAV21A0A0B4J279 112 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 TRGV4A0A0C4DH28 118 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 NXPH4O95158 308 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 TTC32Q5I0X7 151 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 C5orf17Q8NAS9 161 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 KRTAP4-5Q9BYR2 181 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 PSG8Q9UQ74 426 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
PRPF40B-204ENST00000527253 C16orf90A8MZG2 172 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 K7EQD1 137 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 M0R2P5 195 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 SIVA1O15304 175 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 MBP02144 154 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 LINC00315P59091 139 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 KRTAP10-2P60368 255 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 SLAQ13239 276 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 MRPL23Q16540 153 aaKnown RBP7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 Q6ZRN7 208 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 OR2T35Q8NGX2 323 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 ASB13Q8WXK3 278 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 LINC00479Q96M42 142 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 ACTR3CQ9C0K3 210 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 CYTL1Q9NRR1 136 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 EPDR1Q9UM22 224 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 TNFRSF18Q9Y5U5 241 aa7.12□□□□□ -1.27
PRPF40B-204ENST00000527253 TRAV4A0A0B4J268 109 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 SERTM2A0A1B0GWG4 89 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 CXorf1O96002 111 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 GYPEP15421 78 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 DPPA3Q6W0C5 159 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 NEGR1Q7Z3B1 354 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 SPATA12Q7Z6I5 190 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 TMEM75Q8N9X5 138 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 INO80EQ8NBZ0 244 aaPredicted RBP7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 SDF2L1Q9HCN8 221 aa7.11□□□□□ -1.27
PRPF40B-204ENST00000527253 BORCS7-ASMTA0A0B4J1R7 106 aa7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 TRAV34A0A0B4J273 112 aa7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 SMLR1H3BR10 107 aa7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 GCGP01275 180 aa7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 BTF3P20290 206 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 FLI1Q01543 452 aaPredicted RBP7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 PRNTQ86SH4 94 aa7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 OR4C5Q8NGB2 326 aa7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 TMEM167BQ9NRX6 74 aa7.1□□□□□ -1.27
PRPF40B-204ENST00000527253 HSPG2P98160 4391 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 CTXND1A0A1B0GTU2 59 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 A0A1W2PRE2 83 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 C9JCJ5 164 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 TAAR5O14804 337 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 RS1O15537 224 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 GATA1P15976 413 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 SRIP30626 198 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 RGS21Q2M5E4 152 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 WFDC10BQ8IUB3 73 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 CYB561D1Q8N8Q1 229 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 KCNS1Q96KK3 526 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 C9orf85Q96MD7 179 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 NDFIP1Q9BT67 221 aa7.09□□□□□ -1.27
PRPF40B-204ENST00000527253 PGPEP1LA6NFU8 196 aa7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 ARPC5O15511 151 aa7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 ORM1P02763 201 aa7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 PFN1P07737 140 aaKnown RBP7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 UBE2G2P60604 165 aa7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 ZNF876PQ49A33 203 aa7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 SMUG1Q53HV7 270 aa7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 CFAP126Q5VTH2 177 aa7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 DNAH5Q8TE73 4624 aa7.08□□□□□ -1.28
PRPF40B-204ENST00000527253 IGHV3-73A0A0B4J1V6 119 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 IGKV3D-20A0A0C4DH25 116 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 FAM74A7A6NL05 159 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 K7EQM0 130 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 CDK2AP2O75956 126 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 FUSP35637 526 aaKnown RBP eCLIP7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 CRIP1P50238 77 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 ZNF506Q5JVG8 444 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 Q6ZSN1 163 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 SLC25A29Q8N8R3 303 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 PCNPQ8WW12 178 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 ARL2-SNX15V9GYD0 113 aa7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 APOBP04114 4563 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-204ENST00000527253 FBLL1A6NHQ2 334 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 PEX7O00628 323 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 IFNA7P01567 189 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 DNAH10OSP0CZ25 163 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 FHITP49789 147 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 SAPCD1Q5SSQ6 148 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 AKR1C8PQ5T2L2 129 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 OR11H4Q8NGC9 324 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 PTH2Q96A98 100 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 LY96Q9Y6Y9 160 aa7.06□□□□□ -1.28
PRPF40B-204ENST00000527253 MAP1LC3B2A6NCE7 125 aa7.05□□□□□ -1.28
PRPF40B-204ENST00000527253 TIRAPP58753 221 aa7.05□□□□□ -1.28
PRPF40B-204ENST00000527253 DMRTA1Q5VZB9 504 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms