RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 RASL10AQ92737 203 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 HSPG2P98160 4391 aa8.22□□□□□ -1.09
SSBP3-210ENST00000525990 ABCA13Q86UQ4 5058 aa8.21□□□□□ -1.1
SSBP3-210ENST00000525990 IGLV2-11P01706 119 aa8.21□□□□□ -1.1
SSBP3-210ENST00000525990 TCRAP04437 139 aa8.21□□□□□ -1.1
SSBP3-210ENST00000525990 GYPEP15421 78 aa8.21□□□□□ -1.1
SSBP3-210ENST00000525990 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
SSBP3-210ENST00000525990 FAM74A1Q5RGS3 127 aa8.21□□□□□ -1.1
SSBP3-210ENST00000525990 RPL7L1Q6DKI1 246 aaKnown RBP8.21□□□□□ -1.1
SSBP3-210ENST00000525990 SPXQ9BT56 116 aa8.21□□□□□ -1.1
SSBP3-210ENST00000525990 PSMG3Q9BT73 122 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-210ENST00000525990 TRAV21A0A0B4J279 112 aa8.2□□□□□ -1.1
SSBP3-210ENST00000525990 G3V3Q6 166 aa8.2□□□□□ -1.1
SSBP3-210ENST00000525990 SUMO1P63165 101 aaKnown RBP8.2□□□□□ -1.1
SSBP3-210ENST00000525990 ZNF726P1Q15940 193 aa8.2□□□□□ -1.1
SSBP3-210ENST00000525990 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
SSBP3-210ENST00000525990 NEGR1Q7Z3B1 354 aa8.2□□□□□ -1.1
SSBP3-210ENST00000525990 C5orf17Q8NAS9 161 aa8.2□□□□□ -1.1
SSBP3-210ENST00000525990 SUN5Q8TC36 379 aa8.2□□□□□ -1.1
SSBP3-210ENST00000525990 LRP1BQ9NZR2 4599 aa8.2□□□□□ -1.1
SSBP3-210ENST00000525990 FXYD6-FXYD2A0A087WZ82 144 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 TRAV4A0A0B4J268 109 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 M0R2P5 195 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 CDK2AP2O75956 126 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 GIPP09681 153 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-210ENST00000525990 DNAH10OSP0CZ25 163 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 SRIP30626 198 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 SLAQ13239 276 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 PRNTQ86SH4 94 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 IQCF2Q8IXL9 164 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 MAPKAPK5-AS1Q8N8E1 139 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 OR4C5Q8NGB2 326 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 ASB13Q8WXK3 278 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 LINC00479Q96M42 142 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 SDF2L1Q9HCN8 221 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 PSG8Q9UQ74 426 aa8.19□□□□□ -1.1
SSBP3-210ENST00000525990 IGHV3-73A0A0B4J1V6 119 aa8.18□□□□□ -1.1
SSBP3-210ENST00000525990 TRAV34A0A0B4J273 112 aa8.18□□□□□ -1.1
SSBP3-210ENST00000525990 C9JCJ5 164 aa8.18□□□□□ -1.1
SSBP3-210ENST00000525990 GCGP01275 180 aa8.18□□□□□ -1.1
SSBP3-210ENST00000525990 BTF3P20290 206 aaKnown RBP8.18□□□□□ -1.1
SSBP3-210ENST00000525990 ARL6IP6Q8N6S5 226 aa8.18□□□□□ -1.1
SSBP3-210ENST00000525990 EPDR1Q9UM22 224 aa8.18□□□□□ -1.1
SSBP3-210ENST00000525990 TNFSF18Q9UNG2 199 aa8.18□□□□□ -1.1
SSBP3-210ENST00000525990 CXorf1O96002 111 aa8.17□□□□□ -1.1
SSBP3-210ENST00000525990 GATA1P15976 413 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-210ENST00000525990 FGF8P55075 233 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-210ENST00000525990 UBE2G2P60604 165 aa8.17□□□□□ -1.1
SSBP3-210ENST00000525990 SERF2P84101 59 aa8.17□□□□□ -1.1
SSBP3-210ENST00000525990 FLI1Q01543 452 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-210ENST00000525990 PCNPQ8WW12 178 aaKnown RBP8.17□□□□□ -1.1
SSBP3-210ENST00000525990 ACTR3CQ9C0K3 210 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-210ENST00000525990 PGPEP1LA6NFU8 196 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 SMLR1H3BR10 107 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 RNASE3P12724 160 aaKnown RBP8.16□□□□□ -1.1
SSBP3-210ENST00000525990 ZNF876PQ49A33 203 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 CFAP126Q5VTH2 177 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 CYB561D1Q8N8Q1 229 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 OR2T35Q8NGX2 323 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 KCNS1Q96KK3 526 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 C9orf85Q96MD7 179 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 NDFIP1Q9BT67 221 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 LY96Q9Y6Y9 160 aa8.16□□□□□ -1.1
SSBP3-210ENST00000525990 APOBP04114 4563 aaKnown RBP8.16□□□□□ -1.1
SSBP3-210ENST00000525990 DNAH5Q8TE73 4624 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 SERTM2A0A1B0GWG4 89 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 MBP02144 154 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 ORM1P02763 201 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 PFN1P07737 140 aaKnown RBP8.15□□□□□ -1.1
SSBP3-210ENST00000525990 ZNF506Q5JVG8 444 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 NHLRC2Q8NBF2 726 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 INO80EQ8NBZ0 244 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-210ENST00000525990 TMEM167BQ9NRX6 74 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 ARL2-SNX15V9GYD0 113 aa8.15□□□□□ -1.1
SSBP3-210ENST00000525990 IGKV3D-20A0A0C4DH25 116 aa8.14□□□□□ -1.11
SSBP3-210ENST00000525990 CTXND1A0A1B0GTU2 59 aa8.14□□□□□ -1.11
SSBP3-210ENST00000525990 FBLL1A6NHQ2 334 aaKnown RBP8.14□□□□□ -1.11
SSBP3-210ENST00000525990 RS1O15537 224 aa8.14□□□□□ -1.11
SSBP3-210ENST00000525990 SMUG1Q53HV7 270 aa8.14□□□□□ -1.11
SSBP3-210ENST00000525990 Q6ZSN1 163 aa8.14□□□□□ -1.11
SSBP3-210ENST00000525990 TXNDC17Q9BRA2 123 aa8.14□□□□□ -1.11
SSBP3-210ENST00000525990 CYTL1Q9NRR1 136 aa8.14□□□□□ -1.11
SSBP3-210ENST00000525990 BORCS7-ASMTA0A0B4J1R7 106 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 A0A1W2PRE2 83 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 FAM74A7A6NL05 159 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 K7EQM0 130 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 TAAR5O14804 337 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 ARPC5O15511 151 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 Q86TA4 180 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 JPT2Q9H910 190 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 MSRB1Q9NZV6 116 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 Q9UF83 564 aa8.13□□□□□ -1.11
SSBP3-210ENST00000525990 A0A087WTM6 91 aa8.12□□□□□ -1.11
SSBP3-210ENST00000525990 PEX7O00628 323 aa8.12□□□□□ -1.11
SSBP3-210ENST00000525990 IFNA7P01567 189 aa8.12□□□□□ -1.11
SSBP3-210ENST00000525990 CRYGDP07320 174 aa8.12□□□□□ -1.11
SSBP3-210ENST00000525990 FHITP49789 147 aa8.12□□□□□ -1.11
SSBP3-210ENST00000525990 CRIP1P50238 77 aa8.12□□□□□ -1.11
SSBP3-210ENST00000525990 PPT1P50897 306 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms