RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 Q6ZQT7 251 aa13.42□□□□□ -0.26
PTPRK-218ENST00000525459 LY96Q9Y6Y9 160 aa13.42□□□□□ -0.26
PTPRK-218ENST00000525459 PLAC8L1A1L4L8 177 aa13.42□□□□□ -0.26
PTPRK-218ENST00000525459 EMP1P54849 157 aa13.42□□□□□ -0.26
PTPRK-218ENST00000525459 TCL1AP56279 114 aa13.42□□□□□ -0.26
PTPRK-218ENST00000525459 C11orf45Q8TAV5 145 aa13.42□□□□□ -0.26
PTPRK-218ENST00000525459 TP53TG3Q9ULZ0 132 aa13.42□□□□□ -0.26
PTPRK-218ENST00000525459 CXorf65A6NEN9 183 aa13.41□□□□□ -0.26
PTPRK-218ENST00000525459 IGLV2-8P01709 118 aa13.41□□□□□ -0.26
PTPRK-218ENST00000525459 MGST1P10620 155 aaKnown RBP13.41□□□□□ -0.26
PTPRK-218ENST00000525459 DAZ2Q13117 558 aaKnown RBP13.41□□□□□ -0.26
PTPRK-218ENST00000525459 C11orf72Q8NBR9 251 aa13.41□□□□□ -0.26
PTPRK-218ENST00000525459 DKK2Q9UBU2 259 aa13.41□□□□□ -0.26
PTPRK-218ENST00000525459 ZNF727A8MUV8 499 aa13.4□□□□□ -0.26
PTPRK-218ENST00000525459 CRIP1P50238 77 aa13.4□□□□□ -0.26
PTPRK-218ENST00000525459 LINC01559Q495D7 138 aa13.4□□□□□ -0.26
PTPRK-218ENST00000525459 PRR27Q6MZM9 219 aa13.4□□□□□ -0.26
PTPRK-218ENST00000525459 ORM1P02763 201 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 PRM2P04554 102 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 TYMSP04818 313 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 FAM222AQ5U5X8 452 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 UQCC3Q6UW78 93 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 SPXQ9BT56 116 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 C11orf21Q9P2W6 132 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 B4DEV8 164 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 DAZAP1Q96EP5 407 aaKnown RBP13.39□□□□□ -0.27
PTPRK-218ENST00000525459 GSN-AS1Q9NRJ2 163 aa13.39□□□□□ -0.27
PTPRK-218ENST00000525459 CXCL1P09341 107 aa13.38□□□□□ -0.27
PTPRK-218ENST00000525459 SRSF3P84103 164 aaKnown RBP13.38□□□□□ -0.27
PTPRK-218ENST00000525459 IGKV3D-20A0A0C4DH25 116 aa13.37□□□□□ -0.27
PTPRK-218ENST00000525459 IGHV3-16A0A0C4DH30 117 aa13.37□□□□□ -0.27
PTPRK-218ENST00000525459 LGALS9BQ3B8N2 356 aa13.37□□□□□ -0.27
PTPRK-218ENST00000525459 SOHLH1Q5JUK2 328 aa13.37□□□□□ -0.27
PTPRK-218ENST00000525459 DNLZQ5SXM8 178 aa13.37□□□□□ -0.27
PTPRK-218ENST00000525459 NOP10Q9NPE3 64 aaKnown RBP13.37□□□□□ -0.27
PTPRK-218ENST00000525459 CELA1Q9UNI1 258 aa13.37□□□□□ -0.27
PTPRK-218ENST00000525459 PGPEP1LA6NFU8 196 aa13.36□□□□□ -0.27
PTPRK-218ENST00000525459 KRBOX1C9JBD0 128 aa13.36□□□□□ -0.27
PTPRK-218ENST00000525459 ASIPP42127 132 aa13.36□□□□□ -0.27
PTPRK-218ENST00000525459 OCC1Q8TAD7 63 aa13.36□□□□□ -0.27
PTPRK-218ENST00000525459 C19orf71A6NCJ1 209 aa13.36□□□□□ -0.27
PTPRK-218ENST00000525459 C9JQL5 133 aa13.36□□□□□ -0.27
PTPRK-218ENST00000525459 DAD1P61803 113 aa13.36□□□□□ -0.27
PTPRK-218ENST00000525459 OR5I1Q13606 314 aa13.36□□□□□ -0.27
PTPRK-218ENST00000525459 M0R036 132 aa13.35□□□□□ -0.27
PTPRK-218ENST00000525459 GNRH2O43555 120 aa13.35□□□□□ -0.27
PTPRK-218ENST00000525459 P01737 135 aa13.35□□□□□ -0.27
PTPRK-218ENST00000525459 S100A4P26447 101 aaKnown RBP13.35□□□□□ -0.27
PTPRK-218ENST00000525459 RPS20P60866 119 aaKnown RBP13.35□□□□□ -0.27
PTPRK-218ENST00000525459 LINC00612Q8N6U2 182 aa13.35□□□□□ -0.27
PTPRK-218ENST00000525459 MUC7Q8TAX7 377 aa13.35□□□□□ -0.27
PTPRK-218ENST00000525459 NDUFAF3Q9BU61 184 aa13.35□□□□□ -0.27
PTPRK-218ENST00000525459 MDFICQ9P1T7 246 aa13.35□□□□□ -0.27
PTPRK-218ENST00000525459 NAT8Q9UHE5 227 aa13.35□□□□□ -0.27
PTPRK-218ENST00000525459 XKRY2A2RUG3 117 aa13.34□□□□□ -0.27
PTPRK-218ENST00000525459 TMEM241Q24JQ0 296 aa13.34□□□□□ -0.27
PTPRK-218ENST00000525459 LINC01551Q86U37 167 aa13.34□□□□□ -0.27
PTPRK-218ENST00000525459 IL36BQ9NZH7 164 aa13.34□□□□□ -0.27
PTPRK-218ENST00000525459 LINC00862A6NCI5 91 aa13.33□□□□□ -0.27
PTPRK-218ENST00000525459 SPINK4O60575 86 aa13.33□□□□□ -0.27
PTPRK-218ENST00000525459 SFTA3P0C7M3 94 aa13.33□□□□□ -0.27
PTPRK-218ENST00000525459 MED14OSP0DP75 135 aa13.33□□□□□ -0.27
PTPRK-218ENST00000525459 NANOS2P60321 138 aaKnown RBP13.33□□□□□ -0.27
PTPRK-218ENST00000525459 FAM231DQ6ZW35 169 aa13.33□□□□□ -0.27
PTPRK-218ENST00000525459 C9orf85Q96MD7 179 aa13.33□□□□□ -0.27
PTPRK-218ENST00000525459 C18orf15Q96N68 181 aa13.33□□□□□ -0.27
PTPRK-218ENST00000525459 K7EN84 100 aa13.33□□□□□ -0.28
PTPRK-218ENST00000525459 M0R2P5 195 aa13.33□□□□□ -0.28
PTPRK-218ENST00000525459 C12orf74Q32Q52 190 aa13.33□□□□□ -0.28
PTPRK-218ENST00000525459 COMMD7Q86VX2 200 aa13.32□□□□□ -0.28
PTPRK-218ENST00000525459 PTH2Q96A98 100 aa13.32□□□□□ -0.28
PTPRK-218ENST00000525459 TRGV1A0A0A0MS02 117 aa13.31□□□□□ -0.28
PTPRK-218ENST00000525459 TRAV10A0A0B4J240 114 aa13.31□□□□□ -0.28
PTPRK-218ENST00000525459 NUPR2A6NF83 97 aa13.31□□□□□ -0.28
PTPRK-218ENST00000525459 C3orf84H3BNL1 204 aa13.31□□□□□ -0.28
PTPRK-218ENST00000525459 DEFB130BP0DP73 79 aa13.31□□□□□ -0.28
PTPRK-218ENST00000525459 DEFB130AP0DP74 79 aa13.31□□□□□ -0.28
PTPRK-218ENST00000525459 RNASE3P12724 160 aaKnown RBP13.31□□□□□ -0.28
PTPRK-218ENST00000525459 PIK3CD-AS1Q5SR53 167 aa13.31□□□□□ -0.28
PTPRK-218ENST00000525459 Q6ZTC4 211 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 Q6ZTI0 123 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 OR2D3Q8NGH3 330 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 RASL10AQ92737 203 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 MUC4Q99102 2169 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 TMSB15BA0A087X1C1 80 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 ATP5G1P05496 136 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 NUDT10Q8NFP7 164 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 NUDT11Q96G61 164 aa13.3□□□□□ -0.28
PTPRK-218ENST00000525459 RPP21Q9H633 154 aaKnown RBP13.3□□□□□ -0.28
PTPRK-218ENST00000525459 TRGV2A0A075B6R0 118 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 GAGE12BA1L429 117 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 H3BVH4 76 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 GAGE7O76087 117 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 GAGE12FP0CL80 117 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 GAGE12GP0CL81 117 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 GAGE12IP0CL82 117 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 ERVFC1-1P60608 527 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 RPL23P62829 140 aaKnown RBP13.29□□□□□ -0.28
PTPRK-218ENST00000525459 RPL19P84098 196 aaKnown RBP13.29□□□□□ -0.28
PTPRK-218ENST00000525459 PNRC1Q12796 327 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms