RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 C11orf72Q8NBR9 251 aa3.27□□□□□ -1.89
CHMP4A-202ENST00000524955 TMEM263Q8WUH6 116 aaKnown RBP3.27□□□□□ -1.89
CHMP4A-202ENST00000524955 C16orf74Q96GX8 76 aa3.27□□□□□ -1.89
CHMP4A-202ENST00000524955 FMC1Q96HJ9 113 aa3.27□□□□□ -1.89
CHMP4A-202ENST00000524955 PYGO2Q9BRQ0 406 aa3.27□□□□□ -1.89
CHMP4A-202ENST00000524955 NKX6-2Q9C056 277 aaPredicted RBP3.27□□□□□ -1.89
CHMP4A-202ENST00000524955 TENM3Q9P273 2699 aa3.27□□□□□ -1.89
CHMP4A-202ENST00000524955 DEFB131BA0A096LNP1 70 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 IGHV3-73A0A0B4J1V6 119 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 IGKV3D-20A0A0C4DH25 116 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 A0A0J9YY99 117 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 TMEM189A5PLL7 270 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 FABP5P3A8MUU1 101 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 B4DEV8 164 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 F5H768 121 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 IGLV2-8P01709 118 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 PFN1P07737 140 aaKnown RBP3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 SRP19P09132 144 aaKnown RBP3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 SFTA3P0C7M3 94 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 GZMBP10144 247 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 TCL1AP56279 114 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 ZNF415Q09FC8 603 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 ZNF506Q5JVG8 444 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 SAPCD1Q5SSQ6 148 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 CEMP1Q6PRD7 247 aaPredicted RBP3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 ARL6IP6Q8N6S5 226 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 C11orf52Q96A22 123 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 FAM210AQ96ND0 272 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 C20orf144Q9BQM9 153 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 PARLQ9H300 379 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 JPT2Q9H910 190 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 SDF2L1Q9HCN8 221 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 ZFP30Q9Y2G7 519 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 LENEPQ9Y5L5 61 aa3.26□□□□□ -1.89
CHMP4A-202ENST00000524955 TRGV11A0A075B6L2 103 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 TRGV2A0A075B6R0 118 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 TRBV7-9A0A0J9YWB2 115 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 TRBV6-1A0A0K0K1D8 114 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 KRBOX1C9JBD0 128 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 C3orf84H3BNL1 204 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 H3BVH4 76 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 K7EN84 100 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 PDE6DO43924 150 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 ARMS2P0C7Q2 107 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 HOXA5P20719 270 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 S100A4P26447 101 aaKnown RBP3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 GNG4P50150 75 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 RAB14P61106 215 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 FAM162BQ5T6X4 162 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 ZNF493Q6ZR52 646 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 ZNF575Q86XF7 245 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 OCC1Q8TAD7 63 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 ZNF479Q96JC4 524 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 LINC00467Q9BRT7 94 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 MLST8Q9BVC4 326 aa3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 RNASE7Q9H1E1 156 aaKnown RBP3.25□□□□□ -1.89
CHMP4A-202ENST00000524955 IGHV4-4A0A075B6R2 117 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 A0A096LPF7 62 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 TRAV10A0A0B4J240 114 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 LOC100131303A0A0U1RQF7 123 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 NUPR2A6NF83 97 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 LYRM9A8MSI8 78 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 M0R381 172 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 SPINK4O60575 86 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 ATP5G1P05496 136 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 S100A9P06702 114 aaKnown RBP3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 ASIPP42127 132 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 DAZ2Q13117 558 aaKnown RBP3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 TDRG1Q3Y452 100 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 ZNF876PQ49A33 203 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 IBA57Q5T440 356 aaKnown RBP3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 TMEM88Q6PEY1 159 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 POM121L12Q8N7R1 296 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 NUDT10Q8NFP7 164 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 OR2D3Q8NGH3 330 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 NUDT11Q96G61 164 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 KCNS1Q96KK3 526 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 SMIM7Q9BQ49 75 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 TCEAL7Q9BRU2 100 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
CHMP4A-202ENST00000524955 TRAV26-1A0A087WT03 109 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 A0A087WWL8 130 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 FBLL1A6NHQ2 334 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 ZNF727A8MUV8 499 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 TMEM250H0YL14 139 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 M0R2P5 195 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 LY6G6CO95867 125 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 NUDT3O95989 172 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 TAGLN2P37802 199 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 PEA15Q15121 130 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 DMRTA1Q5VZB9 504 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 Q6ZSN1 163 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 COX8CQ7Z4L0 72 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 OR10AG1Q8NH19 301 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 DAZAP1Q96EP5 407 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 C9orf85Q96MD7 179 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms