RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 IGKV2D-40P01614 121 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 SLC25A5P05141 298 aaKnown RBP7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 ATP5G1P05496 136 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 OR10J4P0C629 311 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 ATP5G3P48201 142 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 LINC00612Q8N6U2 182 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 C15orf53Q8NAA6 179 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 OR10D4PQ8NGN7 298 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 ZNF503Q96F45 646 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 SMDT1Q9H4I9 107 aa7.86□□□□□ -1.15
TRAPPC4-204ENST00000524797 DNAH17Q9UFH2 4485 aa7.85□□□□□ -1.15
TRAPPC4-204ENST00000524797 IFITM10A6NMD0 228 aa7.85□□□□□ -1.15
TRAPPC4-204ENST00000524797 KLLNB2CW77 178 aa7.85□□□□□ -1.15
TRAPPC4-204ENST00000524797 PPP1R2P9O14990 202 aa7.85□□□□□ -1.15
TRAPPC4-204ENST00000524797 SEC11BP0C7V7 166 aa7.85□□□□□ -1.15
TRAPPC4-204ENST00000524797 CRISP2P16562 243 aa7.85□□□□□ -1.15
TRAPPC4-204ENST00000524797 PYGO2Q9BRQ0 406 aa7.85□□□□□ -1.15
TRAPPC4-204ENST00000524797 BORCS7-ASMTA0A0B4J1R7 106 aa7.84□□□□□ -1.15
TRAPPC4-204ENST00000524797 A0A1W2PPQ1 181 aa7.84□□□□□ -1.15
TRAPPC4-204ENST00000524797 OR7C2O60412 319 aa7.84□□□□□ -1.15
TRAPPC4-204ENST00000524797 SMIM15Q7Z3B0 74 aa7.84□□□□□ -1.15
TRAPPC4-204ENST00000524797 YPEL4Q96NS1 127 aa7.84□□□□□ -1.15
TRAPPC4-204ENST00000524797 VGLL1Q99990 258 aa7.84□□□□□ -1.15
TRAPPC4-204ENST00000524797 FRAS1Q86XX4 4008 aa7.84□□□□□ -1.15
TRAPPC4-204ENST00000524797 SNURFLB1AK76 121 aa7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 M0R2N4 97 aa7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 RNASE4P34096 147 aaKnown RBP7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 UBE2L3P68036 154 aaKnown RBP7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 ZNF674Q2M3X9 581 aa7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 LGALS9BQ3B8N2 356 aa7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 KHDC3LQ587J8 217 aa7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 SOHLH1Q5JUK2 328 aa7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 TMEM78Q5T7P6 136 aa7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 LINC00467Q9BRT7 94 aa7.84□□□□□ -1.16
TRAPPC4-204ENST00000524797 DLEU1O43261 78 aa7.83□□□□□ -1.16
TRAPPC4-204ENST00000524797 ZNF324O75467 553 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC4-204ENST00000524797 TAS2R45P59539 299 aa7.83□□□□□ -1.16
TRAPPC4-204ENST00000524797 PRR9Q5T870 116 aa7.83□□□□□ -1.16
TRAPPC4-204ENST00000524797 ZFAND2AQ8N6M9 145 aa7.83□□□□□ -1.16
TRAPPC4-204ENST00000524797 Q9H3A6 140 aa7.83□□□□□ -1.16
TRAPPC4-204ENST00000524797 ZNF492Q9P255 531 aa7.83□□□□□ -1.16
TRAPPC4-204ENST00000524797 IGLV2-18A0A075B6J9 118 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 A0A087WWC5 75 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 GAGE12BA1L429 117 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 GAGE7O76087 117 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 GPX1P07203 203 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 GAGE12FP0CL80 117 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 GAGE12GP0CL81 117 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 GAGE12IP0CL82 117 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 RANP62826 216 aaKnown RBP7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 ACOT6Q3I5F7 207 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 CDPF1Q6NVV7 123 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 LINC00336Q6ZUF6 198 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 LYPD1Q8N2G4 141 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 NUDT3O95989 172 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 CSN1S1P47710 185 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 ZNF138P52744 262 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 FAM3BP58499 235 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 RBX1P62877 108 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 DAZ2Q13117 558 aaKnown RBP7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 ANXA2RQ3ZCQ2 193 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 Q6ZR54 194 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST3H2BBQ8N257 126 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 C11orf72Q8NBR9 251 aa7.82□□□□□ -1.16
TRAPPC4-204ENST00000524797 TRBV7-9A0A0J9YWB2 115 aa7.81□□□□□ -1.16
TRAPPC4-204ENST00000524797 RBAKDNA6NC62 111 aa7.81□□□□□ -1.16
TRAPPC4-204ENST00000524797 Q8TAT8 98 aa7.81□□□□□ -1.16
TRAPPC4-204ENST00000524797 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 RTL8CO15255 209 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BKO60814 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BJP06899 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BOP23527 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BBP33778 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 TAGLN2P37802 199 aaKnown RBP7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BDP58876 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BCP62807 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 ELOBQ15370 118 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST2H2BEQ16778 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 AKR1C8PQ5T2L2 129 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 Q6ZQT7 251 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 Q6ZTI0 123 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BHQ93079 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BNQ99877 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HIST1H2BMQ99879 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 ATG101Q9BSB4 218 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 PRO1933Q9H354 126 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 OTORQ9NRC9 128 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 A0A1W2PPV4 95 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 TCL1AP56279 114 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 OR5I1Q13606 314 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 PQLC2Q6ZP29 291 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 KLF12Q9Y4X4 402 aa7.8□□□□□ -1.16
TRAPPC4-204ENST00000524797 HECTD4Q9Y4D8 3996 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 IGHV1OR15-1A0A075B7D0 117 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 FABP4P15090 132 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 ZNF266Q14584 549 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 HSD17B11Q8NBQ5 300 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 OR10G4Q8NGN3 311 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 OR10G9Q8NGN4 311 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms