RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 IGKV3D-20A0A0C4DH25 116 aa9.92□□□□□ -0.82
TRAPPC9-208ENST00000520857 Q1RN00 199 aa9.92□□□□□ -0.82
TRAPPC9-208ENST00000520857 SMAD5-AS1Q9Y6J3 95 aa9.92□□□□□ -0.82
TRAPPC9-208ENST00000520857 TMEM170BQ5T4T1 132 aa9.92□□□□□ -0.82
TRAPPC9-208ENST00000520857 Q6ZQT7 251 aa9.92□□□□□ -0.82
TRAPPC9-208ENST00000520857 SORL1Q92673 2214 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 KLHL30-AS1Q8NEE0 82 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 LINC00527Q9UJ94 153 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 TRAV26-1A0A087WT03 109 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 PHLDA1Q8WV24 401 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 SLC50A1Q9BRV3 221 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 SMIM2Q9BVW6 85 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 PAX8Q06710 450 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 TAL2Q16559 108 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 ORMDL2Q53FV1 153 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
TRAPPC9-208ENST00000520857 SMG1Q96Q15 3661 aaKnown RBP9.9□□□□□ -0.82
TRAPPC9-208ENST00000520857 TNFRSF13BO14836 293 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC9-208ENST00000520857 SCGB1A1P11684 91 aa9.9□□□□□ -0.82
TRAPPC9-208ENST00000520857 HERVK_113P61574 105 aa9.9□□□□□ -0.82
TRAPPC9-208ENST00000520857 C2orf66Q6UXQ4 117 aa9.9□□□□□ -0.82
TRAPPC9-208ENST00000520857 C11orf21Q9P2W6 132 aa9.9□□□□□ -0.82
TRAPPC9-208ENST00000520857 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.82
TRAPPC9-208ENST00000520857 SUMO2P61956 95 aaKnown RBP9.89□□□□□ -0.83
TRAPPC9-208ENST00000520857 PRR30Q53SZ7 412 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC9-208ENST00000520857 ATMQ13315 3056 aa9.89□□□□□ -0.83
TRAPPC9-208ENST00000520857 VMO1Q7Z5L0 202 aa9.89□□□□□ -0.83
TRAPPC9-208ENST00000520857 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
TRAPPC9-208ENST00000520857 G3V318 75 aa9.89□□□□□ -0.83
TRAPPC9-208ENST00000520857 MRAP2Q96G30 205 aa9.89□□□□□ -0.83
TRAPPC9-208ENST00000520857 DOPEY2Q9Y3R5 2298 aa9.88□□□□□ -0.83
TRAPPC9-208ENST00000520857 IGFL3Q6UXB1 125 aa9.88□□□□□ -0.83
TRAPPC9-208ENST00000520857 BEX4Q9NWD9 120 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-208ENST00000520857 PRSS29PA6NIE9 313 aa9.88□□□□□ -0.83
TRAPPC9-208ENST00000520857 DEFB1P60022 68 aa9.88□□□□□ -0.83
TRAPPC9-208ENST00000520857 FOXI1Q12951 378 aa9.88□□□□□ -0.83
TRAPPC9-208ENST00000520857 ZFP2Q6ZN57 461 aa9.88□□□□□ -0.83
TRAPPC9-208ENST00000520857 RNASE4P34096 147 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 C8orf86Q6ZUL3 223 aa9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 OR10J6PQ8NGY7 276 aa9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 PIFOQ8TCI5 191 aa9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 BUB3O43684 328 aa9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 LGALS1P09382 135 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 ASIPP42127 132 aa9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 F8W735 103 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 FAM74A4Q5TZK3 123 aa9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 ZZEF1O43149 2961 aa9.87□□□□□ -0.83
TRAPPC9-208ENST00000520857 IGHG4P01861 327 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 PRTN3P24158 256 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 RAX2Q96IS3 184 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 A8MWV9 139 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 C1QTNF4Q9BXJ3 329 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 PTPRQQ9UMZ3 2332 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 ATP6V0E1O15342 81 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 MT-ATP8P03928 68 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 CRYBA4P53673 196 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 NRACQ8N912 160 aa9.86□□□□□ -0.83
TRAPPC9-208ENST00000520857 CSPG4Q6UVK1 2322 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 LY6LH3BQJ8 138 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 IGF1P05019 195 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 NPBQ8NG41 125 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 EEF1AKMT3Q96AZ1 226 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 PLEKHB2Q96CS7 222 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 SPATA25Q9BR10 227 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 IGHV3OR16-10A0A075B7F0 116 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 GRNP28799 593 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 DPH3P1Q9H4G8 78 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 IGHV7-81A0A0B4J1V7 117 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 ANAPC13Q9BS18 74 aa9.85□□□□□ -0.83
TRAPPC9-208ENST00000520857 TRBV7-3A0A075B6L6 115 aa9.84□□□□□ -0.83
TRAPPC9-208ENST00000520857 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
TRAPPC9-208ENST00000520857 ZNF256Q9Y2P7 627 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-208ENST00000520857 COL27A1Q8IZC6 1860 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-208ENST00000520857 TRAV8-2A0A0B4J237 113 aa9.84□□□□□ -0.83
TRAPPC9-208ENST00000520857 LGALS3P17931 250 aaKnown RBP9.84□□□□□ -0.83
TRAPPC9-208ENST00000520857 LAMA5O15230 3695 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 IGLV2-18A0A075B6J9 118 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 DUSP14O95147 198 aaKnown RBP9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 SRD5A1P18405 259 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 TMEM219Q86XT9 240 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 TP53TG1Q9Y2A0 90 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 TRAV21A0A0B4J279 112 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 IGHV3-11P01762 117 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 OR11H6Q8NGC7 330 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 BAALCQ8WXS3 180 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 KIR2DL4Q99706 377 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
TRAPPC9-208ENST00000520857 C2CD3Q4AC94 2353 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 IGF2RP11717 2491 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 DMXL1Q9Y485 3027 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 A0A087WWL8 130 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 TRAV2A0A0B4J234 112 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 F6UB75 175 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 PRSS2P07478 247 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 ANXA2RQ3ZCQ2 193 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 IGHV7-4-1A0A0J9YVY3 117 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 C9JAW5 83 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms