RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	ZNF705D	P0CH99	300 aa	Predicted RBP	4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	ZNF705B	P0CI00	300 aa	Predicted RBP	4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	HIST1H1E	P10412	219 aa	Known RBP	4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	MIF	P14174	115 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	HLA-DMB	P28068	263 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	RHOB	P62745	196 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	HIST1H1A	Q02539	215 aa	Predicted RBP	4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	OR8A1	Q8NGG7	326 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	RPUSD4	Q96CM3	377 aa	Known RBP	4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	AQP10	Q96PS8	301 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	MFF	Q9GZY8	342 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	SLC35B3	Q9H1N7	401 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	ZNF586	Q9NXT0	402 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	TMEM14C	Q9P0S9	112 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228	TIMM9	Q9Y5J7	89 aa		4.84	□□□□□ -1.63
SDCBP-208	ENST00000520228		A8MTW9	85 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	PYY	P10082	97 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	PRB4	P10163	310 aa	Predicted RBP	4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	ZNF266	Q14584	549 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	AMTN	Q6UX39	209 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	MIR17HG	Q75NE6	70 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228		Q8NAQ8	132 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	OR10J6P	Q8NGY7	276 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	BLNK	Q8WV28	456 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	FAM167A-AS1	Q96KT0	104 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	PAXX	Q9BUH6	204 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	SLC25A2	Q9BXI2	301 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	MRPL32	Q9BYC8	188 aa	Known RBP	4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	OR51M1	Q9H341	326 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	C11orf68	Q9H3H3	251 aa	Known RBP	4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	FUT9	Q9Y231	359 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	GOLT1B	Q9Y3E0	138 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	AGRN	O00468	2067 aa		4.83	□□□□□ -1.64
SDCBP-208	ENST00000520228	RYR3	Q15413	4870 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	SMIM9	A6NGZ8	99 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	BOLA2-SMG1P6	H3BVE0	249 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228		M0R2Z0	102 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	OR7C2	O60412	319 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	OR10J4	P0C629	311 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	NBEAP1	P0C6P0	100 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	RBMY1A1	P0DJD3	496 aa	Known RBP	4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	RBMY1C	P0DJD4	496 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	M6PR	P20645	277 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	TAS2R45	P59539	299 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	PDE6H	Q13956	83 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	RBMY1F	Q15415	496 aa	Known RBP	4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	SPINK13	Q1W4C9	94 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	HSD17B11	Q8NBQ5	300 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	IGF2BP2-AS1	Q96M15	143 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	TMEM208	Q9BTX3	173 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	TNFSF18	Q9UNG2	199 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	RFNG	Q9Y644	331 aa		4.82	□□□□□ -1.64
SDCBP-208	ENST00000520228	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228		A0A1W2PPV4	95 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	RNF222	A6NCQ9	220 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228		G3V3Q6	166 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	INS	P01308	110 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	TSPO	P30536	169 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	RAB2A	P61019	212 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	KHDC3L	Q587J8	217 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	C1orf158	Q8N1D5	194 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	EXOC3-AS1	Q8N2X6	119 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	OR10G4	Q8NGN3	311 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	OR10G9	Q8NGN4	311 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	FXYD5	Q96DB9	178 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	PSMG3	Q9BT73	122 aa	Predicted RBP	4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	PRELID1	Q9Y255	219 aa		4.81	□□□□□ -1.64
SDCBP-208	ENST00000520228	TENM2	Q9NT68	2774 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	TRAV12-2	A0A075B6T6	113 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	TMEM189	A5PLL7	270 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	NUPR2	A6NF83	97 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	SMLR1	H3BR10	107 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228		M0R3E3	92 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	TAAR5	O14804	337 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	ARPC5	O15511	151 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	CRX	O43186	299 aa	Predicted RBP	4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	EIF3G	O75821	320 aa	Known RBP eCLIP	4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	HBE1	P02100	147 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	MB	P02144	154 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	ATP6V0C	P27449	155 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	CDKN1B	P46527	198 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	EMP1	P54849	157 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	RAN	P62826	216 aa	Known RBP	4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	UBE2L3	P68036	154 aa	Known RBP	4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	SERF2	P84101	59 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	RRN3P1	Q2M238	152 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	RPL7L1	Q6DKI1	246 aa	Known RBP	4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	FAM159A	Q6UWV7	190 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	BAP18	Q8IXM2	172 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	RPP25L	Q8N5L8	163 aa	Known RBP	4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	OR2G3	Q8NGZ4	309 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	SH3BGRL3	Q9H299	93 aa		4.8	□□□□□ -1.64
SDCBP-208	ENST00000520228	KLK5	Q9Y337	293 aa	Predicted RBP	4.8	□□□□□ -1.64

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