RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 MRAPQ8TCY5 172 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 ODF3Q96PU9 254 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 LAMA1P25391 3075 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 A0A0B4J2C4 111 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 IGHV1-69DA0A0B4J2H0 117 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 TMEM178BH3BS89 294 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 IGLV1-47P01700 117 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 DYNAPQ8N1N2 210 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 NTN5Q8WTR8 489 aaPredicted RBP9.84□□□□□ -0.83
SMAD1-215ENST00000515385 KAAG1Q9UBP8 84 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 CTSZQ9UBR2 303 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 SIT1Q9Y3P8 196 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 SMAD5-AS1Q9Y6J3 95 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 BUB1B-PAK6H3BSN5 160 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 M0R381 172 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 TRAV2A0A0B4J234 112 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 TRBV10-2A0A0K0K1G8 114 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 C17orf100A8MU93 164 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 PATE3B3GLJ2 98 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 CCL8P80075 99 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 KLHL30-AS1Q8NEE0 82 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 KLK15Q9H2R5 256 aa9.83□□□□□ -0.84
SMAD1-215ENST00000515385 COL27A1Q8IZC6 1860 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-215ENST00000515385 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-215ENST00000515385 FAM240AA0A1B0GVK7 77 aa9.82□□□□□ -0.84
SMAD1-215ENST00000515385 MBD3L4A6NDZ8 208 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-215ENST00000515385 MBD3L3A6NE82 208 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-215ENST00000515385 MBD3L5A6NJ08 208 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-215ENST00000515385 LINC01620Q4KN68 170 aa9.82□□□□□ -0.84
SMAD1-215ENST00000515385 MBD3L2Q8NHZ7 208 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-215ENST00000515385 FAM57AQ8TBR7 257 aa9.82□□□□□ -0.84
SMAD1-215ENST00000515385 IGLV11-55A0A075B6I3 123 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 LGALS9O00182 355 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 LINC00694P0DN24 101 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
SMAD1-215ENST00000515385 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
SMAD1-215ENST00000515385 C21orf62Q9NYP8 219 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 H3BMM0 161 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 LYPD2Q6UXB3 125 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 TMEM263Q8WUH6 116 aaKnown RBP9.81□□□□□ -0.84
SMAD1-215ENST00000515385 UBE2WQ96B02 151 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 DUX5Q96PT3 197 aa9.81□□□□□ -0.84
SMAD1-215ENST00000515385 PRSS33Q8NF86 280 aa9.8□□□□□ -0.84
SMAD1-215ENST00000515385 TMEM141Q96I45 108 aa9.8□□□□□ -0.84
SMAD1-215ENST00000515385 ZNF576Q9H609 170 aa9.8□□□□□ -0.84
SMAD1-215ENST00000515385 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
SMAD1-215ENST00000515385 TIMM23O14925 209 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 DUSP14O95147 198 aaKnown RBP9.79□□□□□ -0.84
SMAD1-215ENST00000515385 CRIP2P52943 208 aaPredicted RBP9.79□□□□□ -0.84
SMAD1-215ENST00000515385 UCNP55089 124 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 PMVKQ15126 192 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 Q6ZQT7 251 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 TRPT1Q86TN4 253 aaKnown RBP9.79□□□□□ -0.84
SMAD1-215ENST00000515385 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 SPEGQ15772 3267 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 IGLV4-69A0A075B6H9 119 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 TRBV7-7A0A0K0K1E9 115 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 F8W735 103 aaPredicted RBP9.79□□□□□ -0.84
SMAD1-215ENST00000515385 ZNF883P0CG24 379 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 ZNRF2Q8NHG8 242 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 TMEM101Q96IK0 257 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 FAM186AA6NE01 2351 aa9.79□□□□□ -0.84
SMAD1-215ENST00000515385 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 NBR2O15453 112 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 CRYGDP07320 174 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 HES1Q14469 280 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 IGFL4Q6B9Z1 124 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 Q6ZS46 218 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 AGPAT4-IT1Q9H0P7 198 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 H3BT86 120 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 NPFFO15130 113 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
SMAD1-215ENST00000515385 FOXC1Q12948 553 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 NPBQ8NG41 125 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 IMUPQ9GZP8 106 aa9.78□□□□□ -0.84
SMAD1-215ENST00000515385 TRAV17A0A0B4J275 112 aa9.77□□□□□ -0.85
SMAD1-215ENST00000515385 F5H768 121 aa9.77□□□□□ -0.85
SMAD1-215ENST00000515385 J3QQQ9 107 aa9.77□□□□□ -0.85
SMAD1-215ENST00000515385 M0R2P5 195 aa9.77□□□□□ -0.85
SMAD1-215ENST00000515385 DEFB121Q5J5C9 76 aa9.77□□□□□ -0.85
SMAD1-215ENST00000515385 SEM1Q6ZVN7 128 aa9.77□□□□□ -0.85
SMAD1-215ENST00000515385 TMEM219Q86XT9 240 aa9.77□□□□□ -0.85
SMAD1-215ENST00000515385 PRO3102Q9H379 93 aa9.77□□□□□ -0.85
SMAD1-215ENST00000515385 A0A1W2PNU3 283 aaPredicted RBP9.76□□□□□ -0.85
SMAD1-215ENST00000515385 LY6LH3BQJ8 138 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 NDUFA7O95182 113 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 C9orf47Q6ZRZ4 202 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 MAFAQ8NHW3 353 aaPredicted RBP9.76□□□□□ -0.85
SMAD1-215ENST00000515385 CCL17Q92583 94 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 TIMM17AQ99595 171 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 ARFGEF3Q5TH69 2177 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 INTS1Q8N201 2190 aaKnown RBP9.76□□□□□ -0.85
SMAD1-215ENST00000515385 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 MED14OSP0DP75 135 aa9.76□□□□□ -0.85
SMAD1-215ENST00000515385 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms