RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 IQCF2Q8IXL9 164 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 RAB24Q969Q5 203 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 PAXXQ9BUH6 204 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 A0A087X0K7 114 aa7.74□□□□□ -1.17
RNF4-216ENST00000511859 SLC17A3O00476 420 aa7.74□□□□□ -1.17
RNF4-216ENST00000511859 CRYGDP07320 174 aa7.74□□□□□ -1.17
RNF4-216ENST00000511859 ARL14EPLP0DKL9 152 aa7.74□□□□□ -1.17
RNF4-216ENST00000511859 FGF8P55075 233 aaPredicted RBP7.74□□□□□ -1.17
RNF4-216ENST00000511859 KHDC3LQ587J8 217 aa7.74□□□□□ -1.17
RNF4-216ENST00000511859 LCN15Q6UWW0 184 aa7.74□□□□□ -1.17
RNF4-216ENST00000511859 ACTR3CQ9C0K3 210 aaPredicted RBP7.74□□□□□ -1.17
RNF4-216ENST00000511859 OR51M1Q9H341 326 aa7.74□□□□□ -1.17
RNF4-216ENST00000511859 HHLA3Q9XRX5 114 aa7.74□□□□□ -1.17
RNF4-216ENST00000511859 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
RNF4-216ENST00000511859 IGLC2P0DOY2 106 aa7.73□□□□□ -1.17
RNF4-216ENST00000511859 CRYBA4P53673 196 aa7.73□□□□□ -1.17
RNF4-216ENST00000511859 TAS2R45P59539 299 aa7.73□□□□□ -1.17
RNF4-216ENST00000511859 UBE2L3P68036 154 aaKnown RBP7.73□□□□□ -1.17
RNF4-216ENST00000511859 WFDC10BQ8IUB3 73 aa7.73□□□□□ -1.17
RNF4-216ENST00000511859 ZNF680Q8NEM1 530 aa7.73□□□□□ -1.17
RNF4-216ENST00000511859 RNF24Q9Y225 148 aa7.73□□□□□ -1.17
RNF4-216ENST00000511859 TRAV12-3A0A0B4J271 114 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 CTXND1A0A1B0GTU2 59 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 NBEAP1P0C6P0 100 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 STAG3L2P0CL84 134 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 STAG3L3P0CL85 134 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
RNF4-216ENST00000511859 EIF5AL1Q6IS14 154 aaKnown RBP7.72□□□□□ -1.17
RNF4-216ENST00000511859 FXYD5Q96DB9 178 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 PHYHIPLQ96FC7 376 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 GSN-AS1Q9NRJ2 163 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 TMEM14CQ9P0S9 112 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 LRP2P98164 4655 aa7.72□□□□□ -1.17
RNF4-216ENST00000511859 TRBV19A0A075B6N1 114 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 MAP1LC3B2A6NCE7 125 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 UMAD1C9J7I0 102 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 SPINK4O60575 86 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 GCHFRP30047 84 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 KRTAP10-4P60372 401 aaPredicted RBP7.71□□□□□ -1.17
RNF4-216ENST00000511859 PQLC2Q6ZP29 291 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 SFT2D1Q8WV19 159 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 SAT2Q96F10 170 aaPredicted RBP7.71□□□□□ -1.17
RNF4-216ENST00000511859 ODF3Q96PU9 254 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 MAP1LC3BQ9GZQ8 125 aa7.71□□□□□ -1.17
RNF4-216ENST00000511859 NDUFB4O95168 129 aa7.71□□□□□ -1.18
RNF4-216ENST00000511859 CXorf1O96002 111 aa7.71□□□□□ -1.18
RNF4-216ENST00000511859 SRIP30626 198 aa7.71□□□□□ -1.18
RNF4-216ENST00000511859 LEPP41159 167 aa7.71□□□□□ -1.18
RNF4-216ENST00000511859 SULT1A2P50226 295 aa7.71□□□□□ -1.18
RNF4-216ENST00000511859 RANP62826 216 aaKnown RBP7.71□□□□□ -1.18
RNF4-216ENST00000511859 ZNF415Q09FC8 603 aa7.71□□□□□ -1.18
RNF4-216ENST00000511859 EXOC3-AS1Q8N2X6 119 aa7.71□□□□□ -1.18
RNF4-216ENST00000511859 SLC50A1Q9BRV3 221 aa7.71□□□□□ -1.18
RNF4-216ENST00000511859 ZNF331Q9NQX6 463 aaPredicted RBP7.71□□□□□ -1.18
RNF4-216ENST00000511859 K7EQD1 137 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 H2AFB1P0C5Y9 115 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 UBE2G2P60604 165 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 FHL2Q14192 279 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 GUK1Q16774 197 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 TDRG1Q3Y452 100 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 ANXA2RQ3ZCQ2 193 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 PCNPQ8WW12 178 aaKnown RBP7.7□□□□□ -1.18
RNF4-216ENST00000511859 C8orf49Q96NF6 230 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 TNXBP22105 4242 aa7.7□□□□□ -1.18
RNF4-216ENST00000511859 IBA57-AS1B1ANH7 110 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 J3KRW8 73 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 M0R3E3 92 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 IGHV3-53P01767 116 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 SLC25A5P05141 298 aaKnown RBP7.69□□□□□ -1.18
RNF4-216ENST00000511859 CT45A10P0DMU9 189 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 TCL1AP56279 114 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 DPPA3Q6W0C5 159 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 SCXQ7RTU7 201 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 EIF4E3Q8N5X7 224 aaKnown RBP7.69□□□□□ -1.18
RNF4-216ENST00000511859 VGLL1Q99990 258 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 RPH3ALQ9UNE2 315 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 KLF12Q9Y4X4 402 aa7.69□□□□□ -1.18
RNF4-216ENST00000511859 IGHV3-38A0A0C4DH36 116 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 PRAC2D3DTV9 90 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 RS1O15537 224 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 ORM1P02763 201 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 RAB5CP51148 216 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 CCL20P78556 96 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 PDE6HQ13956 83 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 IBA57Q5T440 356 aaKnown RBP7.68□□□□□ -1.18
RNF4-216ENST00000511859 TEX261Q6UWH6 196 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 MBD3L1Q8WWY6 194 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 TXNDC17Q9BRA2 123 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 AAMDCQ9H7C9 122 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 TMEM167BQ9NRX6 74 aa7.68□□□□□ -1.18
RNF4-216ENST00000511859 PGPA6NDG6 321 aa7.67□□□□□ -1.18
RNF4-216ENST00000511859 LINC01556Q5JQF7 62 aa7.67□□□□□ -1.18
RNF4-216ENST00000511859 CHAC1Q9BUX1 264 aa7.67□□□□□ -1.18
RNF4-216ENST00000511859 IGKV2-40A0A087WW87 121 aaPredicted RBP7.66□□□□□ -1.18
RNF4-216ENST00000511859 TRGV4A0A0C4DH28 118 aa7.66□□□□□ -1.18
RNF4-216ENST00000511859 C7orf71A4D174 169 aa7.66□□□□□ -1.18
RNF4-216ENST00000511859 PAGE4O60829 102 aa7.66□□□□□ -1.18
RNF4-216ENST00000511859 ZNF253O75346 499 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms