RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 LGALS9CQ6DKI2 356 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 TMEM91Q6ZNR0 172 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 SVBPQ8N300 66 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 OR4B1Q8NGF8 309 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 OR5AK2Q8NH90 309 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 WFDC5Q8TCV5 224 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 RAB37Q96AX2 223 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 LINC00526Q96FQ7 95 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 PRELID3AQ96N28 172 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 SHANK2-AS3Q9BTD1 123 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 VAMP8Q9BV40 100 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 SEC11CQ9BY50 192 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 PLA2G12AQ9BZM1 189 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 C8orf17Q9NRJ1 99 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 SLC39A9Q9NUM3 307 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 FKBP11Q9NYL4 201 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 DEC1Q9P2X7 70 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 TPRKBQ9Y3C4 175 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 VCANP13611 3396 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 MUC3AQ02505 3323 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 NUMA1Q14980 2115 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 IGLV2-18A0A075B6J9 118 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 TRGV10A0A0A0MS01 117 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 IGHV3-43A0A0B4J1X8 118 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 IGHV3-66A0A0C4DH42 116 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 IGHV7-4-1A0A0J9YVY3 117 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 C3orf85A0A1B0GTC6 90 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 C11orf94C9JXX5 98 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 TMEM262E9PQX1 116 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 INS-IGF2F8WCM5 200 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 HRASP01112 189 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 SLC25A5P05141 298 aaKnown RBP2.32□□□□□ -2.04
NUP54-209ENST00000510569 IGLC1P0CG04 106 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 CRYGAP11844 174 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 NPPCP23582 126 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 S100A3P33764 101 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 AKR1C2P52895 323 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 CRISP3P54108 245 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 ARPP19P56211 112 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 Q56UQ5 140 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 Q5BKY6 102 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 FAM74A1Q5RGS3 127 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 C9orf153Q5TBE3 101 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 EIF5AL1Q6IS14 154 aaKnown RBP2.32□□□□□ -2.04
NUP54-209ENST00000510569 NOXRED1Q6NXP6 359 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 C7orf65Q6ZTY9 151 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 Q6ZUT4 128 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 HMGN2P46Q86SG4 172 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 ZNF101Q8IZC7 436 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 DAND5Q8N907 189 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 WFDC11Q8NEX6 87 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 OTOSQ8NHW6 89 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 AQP10Q96PS8 301 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 TXNL4BQ9NX01 149 aaKnown RBP2.32□□□□□ -2.04
NUP54-209ENST00000510569 NDUFB11Q9NX14 153 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 C21orf62Q9NYP8 219 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 XIRP2A4UGR9 3374 aa2.32□□□□□ -2.04
NUP54-209ENST00000510569 TRBV20-1A0A075B6N2 111 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 J3QRE1 110 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 BPY2O14599 106 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 SYNGR2O43760 224 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 TRGC1P0CF51 173 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 GZMBP10144 247 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 IL7P13232 177 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 RPL27AP46776 148 aaKnown RBP2.31□□□□□ -2.04
NUP54-209ENST00000510569 SPINT3P49223 89 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 LSM3P62310 102 aaKnown RBP2.31□□□□□ -2.04
NUP54-209ENST00000510569 SNRPD3P62318 126 aaKnown RBP2.31□□□□□ -2.04
NUP54-209ENST00000510569 RPL30P62888 115 aaKnown RBP2.31□□□□□ -2.04
NUP54-209ENST00000510569 AKR1C1Q04828 323 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 IQCJQ1A5X6 159 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 RNASE13Q5GAN3 156 aaKnown RBP2.31□□□□□ -2.04
NUP54-209ENST00000510569 FAM104BQ5XKR9 115 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 BPIFA4PQ86YQ2 179 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 OR4X2Q8NGF9 303 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 LINC00052Q96N35 136 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 HIST1H2BLQ99880 126 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 CHCHD7Q9BUK0 85 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 TSSK6Q9BXA6 273 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 AGPAT4-IT1Q9H0P7 198 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 SLC35B3Q9H1N7 401 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 SERP1Q9Y6X1 66 aa2.31□□□□□ -2.04
NUP54-209ENST00000510569 TICRRQ7Z2Z1 1910 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 DOCK8Q8NF50 2099 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 IGLV11-55A0A075B6I3 123 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 IGHV5-51A0A0C4DH38 117 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 A0A0D9SG52 128 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 A0A0J9YW62 118 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 IGHV5-10-1A0A0J9YXX1 117 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 C7orf66A4D0T2 115 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 COLCA2A8K830 154 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 H3BT86 120 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 K7ERJ3 54 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 M0R2P5 195 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 YPEL1O60688 119 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 HBDP02042 147 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 PMP2P02689 132 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 RBP4P02753 201 aa2.3□□□□□ -2.04
NUP54-209ENST00000510569 PTHLHP12272 177 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms