RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
PDPN-208ENST00000509009 OR4C5Q8NGB2 326 aa8.49□□□□□ -1.05
PDPN-208ENST00000509009 SUN5Q8TC36 379 aa8.49□□□□□ -1.05
PDPN-208ENST00000509009 SGK494Q96LW2 274 aa8.49□□□□□ -1.05
PDPN-208ENST00000509009 F6UZH7 168 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 TYMSP04818 313 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 ARL14EPLP0DKL9 152 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 NFE4Q86UQ8 179 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 WFDC10BQ8IUB3 73 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 HSD17B11Q8NBQ5 300 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 OR2G3Q8NGZ4 309 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
PDPN-208ENST00000509009 RAB24Q969Q5 203 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 KCNS1Q96KK3 526 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 SCRT2Q9NQ03 307 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 LY96Q9Y6Y9 160 aa8.48□□□□□ -1.05
PDPN-208ENST00000509009 LOC100131303A0A0U1RQF7 123 aa8.47□□□□□ -1.05
PDPN-208ENST00000509009 K7EP13 123 aa8.47□□□□□ -1.05
PDPN-208ENST00000509009 FUSP35637 526 aaKnown RBP eCLIP8.47□□□□□ -1.05
PDPN-208ENST00000509009 CDC34P49427 236 aaPredicted RBP8.47□□□□□ -1.05
PDPN-208ENST00000509009 ZNF80P51504 273 aaPredicted RBP8.47□□□□□ -1.05
PDPN-208ENST00000509009 AQP10Q96PS8 301 aa8.47□□□□□ -1.05
PDPN-208ENST00000509009 TXNDC17Q9BRA2 123 aa8.47□□□□□ -1.05
PDPN-208ENST00000509009 PSMG3Q9BT73 122 aaPredicted RBP8.47□□□□□ -1.05
PDPN-208ENST00000509009 SDF2L1Q9HCN8 221 aa8.47□□□□□ -1.05
PDPN-208ENST00000509009 C11orf21Q9P2W6 132 aa8.47□□□□□ -1.05
PDPN-208ENST00000509009 SERTM2A0A1B0GWG4 89 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 C9JCJ5 164 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 EREGO14944 169 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 TCRAP04437 139 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 DNAH10OSP0CZ25 163 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 GATA1P15976 413 aaPredicted RBP8.46□□□□□ -1.06
PDPN-208ENST00000509009 EVI2AP22794 236 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 ATP6V0CP27449 155 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 GCHFRP30047 84 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 ERVFC1-1P60608 527 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 SUMO1P63165 101 aaKnown RBP8.46□□□□□ -1.06
PDPN-208ENST00000509009 SERF2P84101 59 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 Q5BKY6 102 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 C5orf17Q8NAS9 161 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 ASB13Q8WXK3 278 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 MED28Q9H204 178 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 MSRB1Q9NZV6 116 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 PSG8Q9UQ74 426 aa8.46□□□□□ -1.06
PDPN-208ENST00000509009 A0A087WTM6 91 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 TAAR5O14804 337 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 IGLV2-11P01706 119 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 MBP02144 154 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 TIRAPP58753 221 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 SH2D6Q7Z4S9 175 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 NDFIP1Q9BT67 221 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 EPDR1Q9UM22 224 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 TNFSF18Q9UNG2 199 aa8.45□□□□□ -1.06
PDPN-208ENST00000509009 RS1O15537 224 aa8.44□□□□□ -1.06
PDPN-208ENST00000509009 ZNF876PQ49A33 203 aa8.44□□□□□ -1.06
PDPN-208ENST00000509009 CFAP126Q5VTH2 177 aa8.44□□□□□ -1.06
PDPN-208ENST00000509009 DPPA3Q6W0C5 159 aa8.44□□□□□ -1.06
PDPN-208ENST00000509009 SH3BGRL3Q9H299 93 aa8.44□□□□□ -1.06
PDPN-208ENST00000509009 TMEM167BQ9NRX6 74 aa8.44□□□□□ -1.06
PDPN-208ENST00000509009 FBLL1A6NHQ2 334 aaKnown RBP8.43□□□□□ -1.06
PDPN-208ENST00000509009 GGTLC3B5MD39 225 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 K7EQM0 130 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 CIDEAO60543 219 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 CXorf1O96002 111 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 GCGP01275 180 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 CRYGDP07320 174 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 PFN1P07737 140 aaKnown RBP8.43□□□□□ -1.06
PDPN-208ENST00000509009 FLI1Q01543 452 aaPredicted RBP8.43□□□□□ -1.06
PDPN-208ENST00000509009 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 PRNTQ86SH4 94 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 NHLRC2Q8NBF2 726 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 PTH2Q96A98 100 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
PDPN-208ENST00000509009 ACTR3CQ9C0K3 210 aaPredicted RBP8.43□□□□□ -1.06
PDPN-208ENST00000509009 PGPEP1LA6NFU8 196 aa8.42□□□□□ -1.06
PDPN-208ENST00000509009 PTTG1O95997 202 aa8.42□□□□□ -1.06
PDPN-208ENST00000509009 XGP55808 180 aa8.42□□□□□ -1.06
PDPN-208ENST00000509009 SMUG1Q53HV7 270 aa8.42□□□□□ -1.06
PDPN-208ENST00000509009 SAPCD1Q5SSQ6 148 aa8.42□□□□□ -1.06
PDPN-208ENST00000509009 TMEM75Q8N9X5 138 aa8.42□□□□□ -1.06
PDPN-208ENST00000509009 LINC00479Q96M42 142 aa8.42□□□□□ -1.06
PDPN-208ENST00000509009 IGHV3-73A0A0B4J1V6 119 aa8.41□□□□□ -1.06
PDPN-208ENST00000509009 IGHV3-38A0A0C4DH36 116 aa8.41□□□□□ -1.06
PDPN-208ENST00000509009 TRBV6-4A0A1B0GX49 114 aa8.41□□□□□ -1.06
PDPN-208ENST00000509009 A0A1W2PRE2 83 aa8.41□□□□□ -1.06
PDPN-208ENST00000509009 GIPP09681 153 aaPredicted RBP8.41□□□□□ -1.06
PDPN-208ENST00000509009 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
PDPN-208ENST00000509009 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
PDPN-208ENST00000509009 RPL7L1Q6DKI1 246 aaKnown RBP8.41□□□□□ -1.06
PDPN-208ENST00000509009 C10orf126Q8N4M7 172 aa8.41□□□□□ -1.06
PDPN-208ENST00000509009 CYB561D1Q8N8Q1 229 aa8.41□□□□□ -1.06
PDPN-208ENST00000509009 INO80EQ8NBZ0 244 aaPredicted RBP8.41□□□□□ -1.06
PDPN-208ENST00000509009 PRADC1Q9BSG0 188 aa8.41□□□□□ -1.06
PDPN-208ENST00000509009 TRAV34A0A0B4J273 112 aa8.4□□□□□ -1.06
PDPN-208ENST00000509009 RNF222A6NCQ9 220 aa8.4□□□□□ -1.06
PDPN-208ENST00000509009 PPT1P50897 306 aa8.4□□□□□ -1.06
PDPN-208ENST00000509009 ZNF726P1Q15940 193 aa8.4□□□□□ -1.06
PDPN-208ENST00000509009 LINC01556Q5JQF7 62 aa8.4□□□□□ -1.06
PDPN-208ENST00000509009 ZNF506Q5JVG8 444 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms