RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
HTT-204ENST00000508321 TIMM8BQ9Y5J9 83 aaPredicted RBP7.37□□□□□ -1.23
HTT-204ENST00000508321 PLAC8L1A1L4L8 177 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 IGLV2-8P01709 118 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 TYMSP04818 313 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 SPART-AS1P0CW21 52 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 MGST1P10620 155 aaKnown RBP7.36□□□□□ -1.23
HTT-204ENST00000508321 HTN1P15515 57 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 SOHLH1Q5JUK2 328 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 MUC21Q5SSG8 566 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 WWC2-AS2Q96NR7 200 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 SPXQ9BT56 116 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 NDUFAF3Q9BU61 184 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 DNAH9Q9NYC9 4486 aa7.36□□□□□ -1.23
HTT-204ENST00000508321 XKRY2A2RUG3 117 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 LINC00862A6NCI5 91 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 CXorf65A6NEN9 183 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 B4DEV8 164 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 ORM1P02763 201 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 SFTA3P0C7M3 94 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 MED14OSP0DP75 135 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 ASIPP42127 132 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 RPS20P60866 119 aaKnown RBP7.35□□□□□ -1.23
HTT-204ENST00000508321 LGALS9BQ3B8N2 356 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 DNLZQ5SXM8 178 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 PRR27Q6MZM9 219 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 LINC01551Q86U37 167 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 COMMD7Q86VX2 200 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 C11orf45Q8TAV5 145 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 DAZAP1Q96EP5 407 aaKnown RBP7.35□□□□□ -1.23
HTT-204ENST00000508321 DKK2Q9UBU2 259 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
HTT-204ENST00000508321 KMT2CQ8NEZ4 4911 aaKnown RBP7.35□□□□□ -1.23
HTT-204ENST00000508321 IGKV3D-20A0A0C4DH25 116 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 IGHV3-16A0A0C4DH30 117 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 KRBOX1C9JBD0 128 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 C9JQL5 133 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 P01737 135 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 AZU1P20160 251 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 CRIP1P50238 77 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 EMP1P54849 157 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 SRSF3P84103 164 aaKnown RBP7.34□□□□□ -1.23
HTT-204ENST00000508321 PNRC1Q12796 327 aaPredicted RBP7.34□□□□□ -1.23
HTT-204ENST00000508321 OR5I1Q13606 314 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 PIK3CD-AS1Q5SR53 167 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 FAM222AQ5U5X8 452 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 Q6ZQT7 251 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 FAM231DQ6ZW35 169 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 LINC00612Q8N6U2 182 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 C18orf15Q96N68 181 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 C11orf21Q9P2W6 132 aa7.34□□□□□ -1.23
HTT-204ENST00000508321 PGPEP1LA6NFU8 196 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 DEFB4AO15263 64 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 S100A4P26447 101 aaKnown RBP7.33□□□□□ -1.24
HTT-204ENST00000508321 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 CT83Q5H943 113 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 OCC1Q8TAD7 63 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 PTH2Q96A98 100 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 C9orf85Q96MD7 179 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 GSN-AS1Q9NRJ2 163 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 IL36BQ9NZH7 164 aa7.33□□□□□ -1.24
HTT-204ENST00000508321 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
HTT-204ENST00000508321 K7EN84 100 aa7.32□□□□□ -1.24
HTT-204ENST00000508321 M0R036 132 aa7.32□□□□□ -1.24
HTT-204ENST00000508321 M0R2P5 195 aa7.32□□□□□ -1.24
HTT-204ENST00000508321 SPINK4O60575 86 aa7.32□□□□□ -1.24
HTT-204ENST00000508321 DAD1P61803 113 aa7.32□□□□□ -1.24
HTT-204ENST00000508321 C15orf54Q8N8G6 183 aa7.32□□□□□ -1.24
HTT-204ENST00000508321 RPP21Q9H633 154 aaKnown RBP7.32□□□□□ -1.24
HTT-204ENST00000508321 NOP10Q9NPE3 64 aaKnown RBP7.32□□□□□ -1.24
HTT-204ENST00000508321 CELA1Q9UNI1 258 aa7.32□□□□□ -1.24
HTT-204ENST00000508321 NUPR2A6NF83 97 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 GNRH2O43555 120 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 PRM2P04554 102 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 ERVFC1-1P60608 527 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 RPL23P62829 140 aaKnown RBP7.31□□□□□ -1.24
HTT-204ENST00000508321 ADIRFQ15847 76 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 OR2D3Q8NGH3 330 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 RASL10AQ92737 203 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 ISOC2Q96AB3 205 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 OSTCQ9NRP0 149 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 MDFICQ9P1T7 246 aa7.31□□□□□ -1.24
HTT-204ENST00000508321 TRGV1A0A0A0MS02 117 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 TRAV10A0A0B4J240 114 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 A0A1W2PPQ1 181 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 TMEM218A2RU14 115 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 H3BVH4 76 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 SNAI2O43623 268 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 OR5AL1P0C617 328 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 RNASE3P12724 160 aaKnown RBP7.3□□□□□ -1.24
HTT-204ENST00000508321 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 ZFP82Q8N141 532 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 SYT8Q8NBV8 401 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 MUC7Q8TAX7 377 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 SEC11CQ9BY50 192 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 SCRT2Q9NQ03 307 aa7.3□□□□□ -1.24
HTT-204ENST00000508321 TRGV2A0A075B6R0 118 aa7.29□□□□□ -1.24
HTT-204ENST00000508321 TMSB15BA0A087X1C1 80 aa7.29□□□□□ -1.24
HTT-204ENST00000508321 FAM231BA6NCW3 169 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms