RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 TNRC6AQ8NDV7 1962 aaKnown RBP1.63□□□□□ -2.15
DHFR-204ENST00000508282 UHRF1BP1LA0JNW5 1464 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 ROCK2O75116 1388 aaKnown RBP1.62□□□□□ -2.15
DHFR-204ENST00000508282 TMEM2Q9UHN6 1383 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 FOCADQ5VW36 1801 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 SPEF2Q9C093 1822 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 KIF13AQ9H1H9 1805 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 IGKV3D-7A0A0C4DH55 119 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 IGKV3OR2-268A0A0C4DH90 116 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 PYYP10082 97 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 ADCYAP1P18509 176 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 SCIMPQ6UWF3 145 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 IDO2Q6ZQW0 420 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 PSMG3Q9BT73 122 aaPredicted RBP1.62□□□□□ -2.15
DHFR-204ENST00000508282 CYSTM1Q9H1C7 97 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 NALCNQ8IZF0 1738 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 KIDINS220Q9ULH0 1771 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 PTPRDP23468 1912 aa1.62□□□□□ -2.15
DHFR-204ENST00000508282 MYO18AQ92614 2054 aaKnown RBP1.62□□□□□ -2.15
DHFR-204ENST00000508282 EML5Q05BV3 1969 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 ERBINQ96RT1 1412 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 LOC110117498A0A087WWA1 95 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 IGLV3-32A0A0A0MS00 114 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 A0A1W2PRS3 328 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 LINC00587B1AMM8 73 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 J3QLW9 94 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 M0R2N4 97 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 INE1O15225 51 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 CCL25O15444 150 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 PPYP01298 95 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 UNQ6190/PRO20217Q6UXQ8 127 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 ATP11AUNQ6ZP68 121 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 LINC00299Q6ZSB3 139 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 C2orf88Q9BSF0 95 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 TAS2R8Q9NYW2 309 aa1.61□□□□□ -2.15
DHFR-204ENST00000508282 PTPRGP23470 1445 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 SMG6Q86US8 1419 aaKnown RBP1.6□□□□□ -2.15
DHFR-204ENST00000508282 MCM3APO60318 1980 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 TRBV6-7A0A0A0MS04 114 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 JMJD7-PLA2G4BH0Y9G9 81 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 APOC1P02654 83 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 ZNF25P17030 456 aaPredicted RBP1.6□□□□□ -2.15
DHFR-204ENST00000508282 LINC00322Q6ZN03 302 aaPredicted RBP1.6□□□□□ -2.15
DHFR-204ENST00000508282 Q6ZUT4 128 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 SLC25A26Q70HW3 274 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 KCNRGQ8N5I3 272 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 SDF2Q99470 211 aa1.6□□□□□ -2.15
DHFR-204ENST00000508282 EIF4G3O43432 1585 aaKnown RBP1.59□□□□□ -2.15
DHFR-204ENST00000508282 SDK1Q7Z5N4 2213 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 NAIPQ13075 1403 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 COL4A1P02462 1669 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 IGKV3-7A0A075B6H7 116 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 IGKV2-40A0A087WW87 121 aaPredicted RBP1.59□□□□□ -2.15
DHFR-204ENST00000508282 IGKV2D-40P01614 121 aaPredicted RBP1.59□□□□□ -2.15
DHFR-204ENST00000508282 IL9P15248 144 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 SPRNQ5BIV9 151 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 LINC01545Q5VT33 79 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 TMEM203Q969S6 136 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 CGREF1Q99674 301 aa1.59□□□□□ -2.15
DHFR-204ENST00000508282 CASP8AP2Q9UKL3 1982 aa1.59□□□□□ -2.16
DHFR-204ENST00000508282 ADGRB2O60241 1585 aa1.59□□□□□ -2.16
DHFR-204ENST00000508282 TRAV2A0A0B4J234 112 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 TMEM30CPA0ZSE6 113 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 APODP05090 189 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 POLR2JP52435 117 aaKnown RBP1.58□□□□□ -2.16
DHFR-204ENST00000508282 WHAMMP3Q1A5X7 153 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 GDF5OSQ5U4N7 250 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 MIC13Q5XKP0 118 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 UNQ5815/PRO19632Q6UWF5 114 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 VSTM2AQ8TAG5 236 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 DYNLRB2Q8TF09 96 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 WFDC10AQ9H1F0 79 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 ADGRB1O14514 1584 aa1.58□□□□□ -2.16
DHFR-204ENST00000508282 TRAV17A0A0B4J275 112 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 A0A0J9YY99 117 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 KLF7O75840 302 aaPredicted RBP1.57□□□□□ -2.16
DHFR-204ENST00000508282 IGF2P01344 180 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 PRB1P04280 392 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 IL7P13232 177 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 RHOHQ15669 191 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 COPS9Q8WXC6 57 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 LIMD2Q9BT23 127 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 PDCD10Q9BUL8 212 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 ZFP30Q9Y2G7 519 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 LRP5O75197 1615 aa1.57□□□□□ -2.16
DHFR-204ENST00000508282 TRAV12-2A0A075B6T6 113 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 TRAV23DV6A0A075B6W5 121 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 IFNGP01579 166 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 MEIG1Q5JSS6 88 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.56□□□□□ -2.16
DHFR-204ENST00000508282 PLPP5Q8NEB5 264 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 PPDPFLQ8WWR9 84 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 DPH3Q96FX2 82 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 MRPL57Q9BQC6 102 aaKnown RBP1.56□□□□□ -2.16
DHFR-204ENST00000508282 AKAP11Q9UKA4 1901 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 BCL9LQ86UU0 1499 aa1.56□□□□□ -2.16
DHFR-204ENST00000508282 RIMS1Q86UR5 1692 aaKnown RBP1.55□□□□□ -2.16
DHFR-204ENST00000508282 CASZ1Q86V15 1759 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 PLXNA2O75051 1894 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms