RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 RNF222A6NCQ9 220 aa9.79□□□□□ -0.84
RAB28-205ENST00000508274 NXPH4O95158 308 aa9.79□□□□□ -0.84
RAB28-205ENST00000508274 TYMSP04818 313 aa9.79□□□□□ -0.84
RAB28-205ENST00000508274 GCHFRP30047 84 aa9.79□□□□□ -0.84
RAB28-205ENST00000508274 RASL10AQ92737 203 aa9.79□□□□□ -0.84
RAB28-205ENST00000508274 TRAV21A0A0B4J279 112 aa9.78□□□□□ -0.84
RAB28-205ENST00000508274 IGHV3-16A0A0C4DH30 117 aa9.78□□□□□ -0.84
RAB28-205ENST00000508274 A0A1W2PPQ1 181 aa9.78□□□□□ -0.84
RAB28-205ENST00000508274 SIVA1O15304 175 aa9.78□□□□□ -0.84
RAB28-205ENST00000508274 GIPP09681 153 aaPredicted RBP9.78□□□□□ -0.84
RAB28-205ENST00000508274 LINC00315P59091 139 aa9.78□□□□□ -0.84
RAB28-205ENST00000508274 ARL6IP6Q8N6S5 226 aa9.78□□□□□ -0.84
RAB28-205ENST00000508274 SUN5Q8TC36 379 aa9.78□□□□□ -0.84
RAB28-205ENST00000508274 SPXQ9BT56 116 aa9.78□□□□□ -0.84
RAB28-205ENST00000508274 FXYD6-FXYD2A0A087WZ82 144 aa9.77□□□□□ -0.85
RAB28-205ENST00000508274 GGTLC3B5MD39 225 aa9.77□□□□□ -0.85
RAB28-205ENST00000508274 TCRAP04437 139 aa9.77□□□□□ -0.85
RAB28-205ENST00000508274 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
RAB28-205ENST00000508274 RPL7L1Q6DKI1 246 aaKnown RBP9.77□□□□□ -0.85
RAB28-205ENST00000508274 LYPD5Q6UWN5 251 aa9.77□□□□□ -0.85
RAB28-205ENST00000508274 K7EQD1 137 aa9.76□□□□□ -0.85
RAB28-205ENST00000508274 SERF2P84101 59 aa9.76□□□□□ -0.85
RAB28-205ENST00000508274 SLAQ13239 276 aa9.76□□□□□ -0.85
RAB28-205ENST00000508274 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
RAB28-205ENST00000508274 LCE2CQ5TA81 110 aa9.76□□□□□ -0.85
RAB28-205ENST00000508274 SPATA12Q7Z6I5 190 aa9.76□□□□□ -0.85
RAB28-205ENST00000508274 C5orf17Q8NAS9 161 aa9.76□□□□□ -0.85
RAB28-205ENST00000508274 C11orf21Q9P2W6 132 aa9.76□□□□□ -0.85
RAB28-205ENST00000508274 DNAH5Q8TE73 4624 aa9.76□□□□□ -0.85
RAB28-205ENST00000508274 M0R2P5 195 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 MBP02144 154 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 GYPEP15421 78 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 SUMO1P63165 101 aaKnown RBP9.75□□□□□ -0.85
RAB28-205ENST00000508274 ZNF726P1Q15940 193 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
RAB28-205ENST00000508274 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 IQCF2Q8IXL9 164 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 TNFSF18Q9UNG2 199 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 ABCA13Q86UQ4 5058 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 APOBP04114 4563 aaKnown RBP9.75□□□□□ -0.85
RAB28-205ENST00000508274 TRAV4A0A0B4J268 109 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 LOC100131303A0A0U1RQF7 123 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 G3V3Q6 166 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 CXorf1O96002 111 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 IGLV2-11P01706 119 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 KRTAP10-2P60368 255 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 INO80EQ8NBZ0 244 aaPredicted RBP9.75□□□□□ -0.85
RAB28-205ENST00000508274 OR2T35Q8NGX2 323 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 NDFIP1Q9BT67 221 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 KRTAP4-5Q9BYR2 181 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 ACTR3CQ9C0K3 210 aaPredicted RBP9.75□□□□□ -0.85
RAB28-205ENST00000508274 SDF2L1Q9HCN8 221 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 PSG8Q9UQ74 426 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
RAB28-205ENST00000508274 SERTM2A0A1B0GWG4 89 aa9.74□□□□□ -0.85
RAB28-205ENST00000508274 SRIP30626 198 aa9.74□□□□□ -0.85
RAB28-205ENST00000508274 OR4C5Q8NGB2 326 aa9.74□□□□□ -0.85
RAB28-205ENST00000508274 ASB13Q8WXK3 278 aa9.74□□□□□ -0.85
RAB28-205ENST00000508274 TMEM167BQ9NRX6 74 aa9.74□□□□□ -0.85
RAB28-205ENST00000508274 GCGP01275 180 aa9.73□□□□□ -0.85
RAB28-205ENST00000508274 PRNTQ86SH4 94 aa9.73□□□□□ -0.85
RAB28-205ENST00000508274 WFDC10BQ8IUB3 73 aa9.73□□□□□ -0.85
RAB28-205ENST00000508274 PCNPQ8WW12 178 aaKnown RBP9.73□□□□□ -0.85
RAB28-205ENST00000508274 KCNS1Q96KK3 526 aa9.73□□□□□ -0.85
RAB28-205ENST00000508274 EPDR1Q9UM22 224 aa9.73□□□□□ -0.85
RAB28-205ENST00000508274 BORCS7-ASMTA0A0B4J1R7 106 aa9.72□□□□□ -0.85
RAB28-205ENST00000508274 C9JCJ5 164 aa9.72□□□□□ -0.85
RAB28-205ENST00000508274 K7EQM0 130 aa9.72□□□□□ -0.85
RAB28-205ENST00000508274 BTF3P20290 206 aaKnown RBP9.72□□□□□ -0.85
RAB28-205ENST00000508274 FLI1Q01543 452 aaPredicted RBP9.72□□□□□ -0.85
RAB28-205ENST00000508274 CYB561D1Q8N8Q1 229 aa9.72□□□□□ -0.85
RAB28-205ENST00000508274 LINC00479Q96M42 142 aa9.72□□□□□ -0.85
RAB28-205ENST00000508274 TRAV34A0A0B4J273 112 aa9.71□□□□□ -0.85
RAB28-205ENST00000508274 PFN1P07737 140 aaKnown RBP9.71□□□□□ -0.85
RAB28-205ENST00000508274 FGF8P55075 233 aaPredicted RBP9.71□□□□□ -0.85
RAB28-205ENST00000508274 UBE2G2P60604 165 aa9.71□□□□□ -0.85
RAB28-205ENST00000508274 DPPA3Q6W0C5 159 aa9.71□□□□□ -0.85
RAB28-205ENST00000508274 TAAR5O14804 337 aa9.71□□□□□ -0.86
RAB28-205ENST00000508274 ORM1P02763 201 aa9.71□□□□□ -0.86
RAB28-205ENST00000508274 ZFP69Q49AA0 526 aa9.71□□□□□ -0.86
RAB28-205ENST00000508274 SMUG1Q53HV7 270 aa9.71□□□□□ -0.86
RAB28-205ENST00000508274 CTXND1A0A1B0GTU2 59 aa9.7□□□□□ -0.86
RAB28-205ENST00000508274 A0A1W2PRE2 83 aa9.7□□□□□ -0.86
RAB28-205ENST00000508274 ARPC5O15511 151 aa9.7□□□□□ -0.86
RAB28-205ENST00000508274 CDK2AP2O75956 126 aa9.7□□□□□ -0.86
RAB28-205ENST00000508274 GATA1P15976 413 aaPredicted RBP9.7□□□□□ -0.86
RAB28-205ENST00000508274 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
RAB28-205ENST00000508274 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
RAB28-205ENST00000508274 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
RAB28-205ENST00000508274 TXNDC17Q9BRA2 123 aa9.7□□□□□ -0.86
RAB28-205ENST00000508274 LY96Q9Y6Y9 160 aa9.7□□□□□ -0.86
RAB28-205ENST00000508274 IGHV3-73A0A0B4J1V6 119 aa9.69□□□□□ -0.86
RAB28-205ENST00000508274 SMLR1H3BR10 107 aa9.69□□□□□ -0.86
RAB28-205ENST00000508274 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
RAB28-205ENST00000508274 CFAP126Q5VTH2 177 aa9.69□□□□□ -0.86
RAB28-205ENST00000508274 CYTL1Q9NRR1 136 aa9.69□□□□□ -0.86
RAB28-205ENST00000508274 ARL2-SNX15V9GYD0 113 aa9.69□□□□□ -0.86
RAB28-205ENST00000508274 PGPEP1LA6NFU8 196 aa9.68□□□□□ -0.86
RAB28-205ENST00000508274 FBLL1A6NHQ2 334 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms