RNA–Protein interactions for RNA: ENST00000507226.1

CCHCR1-221, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-221ENST00000507226 CRIP1P50238 77 aa12.63□□□□□ -0.39
CCHCR1-221ENST00000507226 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
CCHCR1-221ENST00000507226 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
CCHCR1-221ENST00000507226 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
CCHCR1-221ENST00000507226 SDF2L1Q9HCN8 221 aa12.63□□□□□ -0.39
CCHCR1-221ENST00000507226 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 GAGE12BA1L429 117 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 FABP5P3A8MUU1 101 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 GAGE7O76087 117 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 HTN3P15516 51 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 RPL35P42766 123 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 Q6ZTI0 123 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 BAGE2Q86Y30 109 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 NHLRC2Q8NBF2 726 aa12.62□□□□□ -0.39
CCHCR1-221ENST00000507226 RBFOX3A6NFN3 312 aa12.61□□□□□ -0.39
CCHCR1-221ENST00000507226 SPINK4O60575 86 aa12.61□□□□□ -0.39
CCHCR1-221ENST00000507226 SH2D1AO60880 128 aa12.61□□□□□ -0.39
CCHCR1-221ENST00000507226 PCNPQ8WW12 178 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-221ENST00000507226 MLST8Q9BVC4 326 aa12.61□□□□□ -0.39
CCHCR1-221ENST00000507226 MED9Q9NWA0 146 aa12.61□□□□□ -0.39
CCHCR1-221ENST00000507226 STARD9Q9P2P6 4700 aa12.6□□□□□ -0.39
CCHCR1-221ENST00000507226 TRGV1A0A0A0MS02 117 aa12.6□□□□□ -0.39
CCHCR1-221ENST00000507226 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
CCHCR1-221ENST00000507226 IGLL5B9A064 214 aa12.6□□□□□ -0.39
CCHCR1-221ENST00000507226 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
CCHCR1-221ENST00000507226 ZNF506Q5JVG8 444 aa12.6□□□□□ -0.39
CCHCR1-221ENST00000507226 FAM162BQ5T6X4 162 aa12.6□□□□□ -0.39
CCHCR1-221ENST00000507226 ATP5G1P05496 136 aa12.59□□□□□ -0.39
CCHCR1-221ENST00000507226 SPXQ9BT56 116 aa12.59□□□□□ -0.39
CCHCR1-221ENST00000507226 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-221ENST00000507226 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
CCHCR1-221ENST00000507226 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
CCHCR1-221ENST00000507226 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
CCHCR1-221ENST00000507226 TOR2AQ5JU69 321 aa12.58□□□□□ -0.4
CCHCR1-221ENST00000507226 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
CCHCR1-221ENST00000507226 ORM1P02763 201 aa12.57□□□□□ -0.4
CCHCR1-221ENST00000507226 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
CCHCR1-221ENST00000507226 FAM210AQ96ND0 272 aa12.57□□□□□ -0.4
CCHCR1-221ENST00000507226 APLNQ9ULZ1 77 aa12.57□□□□□ -0.4
CCHCR1-221ENST00000507226 DYNC2H1Q8NCM8 4307 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-221ENST00000507226 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
CCHCR1-221ENST00000507226 TRGV2A0A075B6R0 118 aa12.56□□□□□ -0.4
CCHCR1-221ENST00000507226 B4DEV8 164 aa12.56□□□□□ -0.4
CCHCR1-221ENST00000507226 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
CCHCR1-221ENST00000507226 F5H768 121 aa12.56□□□□□ -0.4
CCHCR1-221ENST00000507226 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
CCHCR1-221ENST00000507226 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
CCHCR1-221ENST00000507226 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 TMEM250H0YL14 139 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 M0R036 132 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 M0R2P5 195 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 RNASE3P12724 160 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 GNG4P50150 75 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 TCTAP57738 103 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 RASL10AQ92737 203 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 FAM210BQ96KR6 192 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 C9orf85Q96MD7 179 aa12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 EIF5A2Q9GZV4 153 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-221ENST00000507226 PRR27Q6MZM9 219 aa12.54□□□□□ -0.4
CCHCR1-221ENST00000507226 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
CCHCR1-221ENST00000507226 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
CCHCR1-221ENST00000507226 LCE6AA0A183 80 aa12.53□□□□□ -0.4
CCHCR1-221ENST00000507226 PGPEP1LA6NFU8 196 aa12.53□□□□□ -0.4
CCHCR1-221ENST00000507226 NDUFS6O75380 124 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-221ENST00000507226 HOXA5P20719 270 aa12.53□□□□□ -0.4
CCHCR1-221ENST00000507226 ASIPP42127 132 aa12.53□□□□□ -0.4
CCHCR1-221ENST00000507226 SMIM12Q96EX1 92 aa12.53□□□□□ -0.4
CCHCR1-221ENST00000507226 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
CCHCR1-221ENST00000507226 PARLQ9H300 379 aa12.53□□□□□ -0.4
CCHCR1-221ENST00000507226 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
CCHCR1-221ENST00000507226 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.41
CCHCR1-221ENST00000507226 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
CCHCR1-221ENST00000507226 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-221ENST00000507226 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-221ENST00000507226 DNLZQ5SXM8 178 aa12.52□□□□□ -0.41
CCHCR1-221ENST00000507226 C9JCJ5 164 aa12.51□□□□□ -0.41
CCHCR1-221ENST00000507226 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-221ENST00000507226 RPL19P84098 196 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-221ENST00000507226 OR5I1Q13606 314 aa12.51□□□□□ -0.41
CCHCR1-221ENST00000507226 PTH2Q96A98 100 aa12.51□□□□□ -0.41
CCHCR1-221ENST00000507226 H3BVH4 76 aa12.5□□□□□ -0.41
CCHCR1-221ENST00000507226 CEBPGP53567 150 aa12.5□□□□□ -0.41
CCHCR1-221ENST00000507226 POM121L12Q8N7R1 296 aa12.5□□□□□ -0.41
CCHCR1-221ENST00000507226 LINC00476Q8WZB0 136 aa12.5□□□□□ -0.41
CCHCR1-221ENST00000507226 IL36BQ9NZH7 164 aa12.5□□□□□ -0.41
CCHCR1-221ENST00000507226 C19orf71A6NCJ1 209 aa12.49□□□□□ -0.41
CCHCR1-221ENST00000507226 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
CCHCR1-221ENST00000507226 IFITM2Q01629 132 aa12.49□□□□□ -0.41
CCHCR1-221ENST00000507226 ZNF876PQ49A33 203 aa12.49□□□□□ -0.41
CCHCR1-221ENST00000507226 ZNF479Q96JC4 524 aa12.49□□□□□ -0.41
CCHCR1-221ENST00000507226 TRAV26-1A0A087WT03 109 aa12.48□□□□□ -0.41
CCHCR1-221ENST00000507226 TRAV4A0A0B4J268 109 aa12.48□□□□□ -0.41
CCHCR1-221ENST00000507226 CXCL1P09341 107 aa12.48□□□□□ -0.41
CCHCR1-221ENST00000507226 SFTA3P0C7M3 94 aa12.48□□□□□ -0.41
CCHCR1-221ENST00000507226 SRSF3P84103 164 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-221ENST00000507226 OCC1Q8TAD7 63 aa12.48□□□□□ -0.41
CCHCR1-221ENST00000507226 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms