RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TMEM183BQ1AE95 376 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 TMEM183AQ8IXX5 376 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 C5orf17Q8NAS9 161 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 RASL10AQ92737 203 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 SPXQ9BT56 116 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 SH3BGRL3Q9H299 93 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 RPH3ALQ9UNE2 315 aa6.25□□□□□ -1.41
PDLIM5-209ENST00000506632 TRGV11A0A075B6L2 103 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 TRAV21A0A0B4J279 112 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 SERTM2A0A1B0GWG4 89 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 PAX4O43316 350 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 IGHV3-53P01767 116 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 TCRAP04437 139 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 MED14OSP0DP75 135 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 CRYBA4P53673 196 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 SLAQ13239 276 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 TTC32Q5I0X7 151 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 RPL7L1Q6DKI1 246 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 FAM159AQ6UWV7 190 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 IQCF2Q8IXL9 164 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 TREM1Q9NP99 234 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 PRO0255Q9UI72 69 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 ICOSQ9Y6W8 199 aa6.24□□□□□ -1.41
PDLIM5-209ENST00000506632 FXYD6-FXYD2A0A087WZ82 144 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 IGHV3-16A0A0C4DH30 117 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 GGTLC3B5MD39 225 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 F6UZH7 168 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 CXorf1O96002 111 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 IGLV2-11P01706 119 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 BTF3P20290 206 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 ZNF726P1Q15940 193 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 ZNF575Q86XF7 245 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 INO80EQ8NBZ0 244 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 OR2T35Q8NGX2 323 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 ZNF479Q96JC4 524 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 C8orf49Q96NF6 230 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 SSBP4Q9BWG4 385 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 ACTR3CQ9C0K3 210 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 TMEM167BQ9NRX6 74 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 HHLA3Q9XRX5 114 aa6.23□□□□□ -1.41
PDLIM5-209ENST00000506632 BORCS7-ASMTA0A0B4J1R7 106 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 A0A1W2PRE2 83 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 GNRH2O43555 120 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 TYMSP04818 313 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 SFTA3P0C7M3 94 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 ZNF80P51504 273 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 MRPL23Q16540 153 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 RGS21Q2M5E4 152 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 SGK494Q96LW2 274 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 NAGKQ9UJ70 344 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 EPDR1Q9UM22 224 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 PSG8Q9UQ74 426 aa6.22□□□□□ -1.41
PDLIM5-209ENST00000506632 TRAV4A0A0B4J268 109 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 TRGV4A0A0C4DH28 118 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 CTXND1A0A1B0GTU2 59 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 M0R2P5 195 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 MALP21145 153 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 LYPD5Q6UWN5 251 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 NEGR1Q7Z3B1 354 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 CYB561D1Q8N8Q1 229 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 TMEM75Q8N9X5 138 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 KCNS1Q96KK3 526 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 NDFIP1Q9BT67 221 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 SDF2L1Q9HCN8 221 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 CYTL1Q9NRR1 136 aa6.21□□□□□ -1.42
PDLIM5-209ENST00000506632 FBLL1A6NHQ2 334 aaKnown RBP6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 K7EQD1 137 aa6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 K7EQM0 130 aa6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 TAAR5O14804 337 aa6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 SIVA1O15304 175 aa6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 NXPH4O95158 308 aa6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 GCGP01275 180 aa6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 ORM1P02763 201 aa6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 PFN1P07737 140 aaKnown RBP6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 FLI1Q01543 452 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 Q6ZRN7 208 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 C9orf85Q96MD7 179 aa6.2□□□□□ -1.42
PDLIM5-209ENST00000506632 ARPC5O15511 151 aa6.19□□□□□ -1.42
PDLIM5-209ENST00000506632 LINC00315P59091 139 aa6.19□□□□□ -1.42
PDLIM5-209ENST00000506632 SMUG1Q53HV7 270 aa6.19□□□□□ -1.42
PDLIM5-209ENST00000506632 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
PDLIM5-209ENST00000506632 OR4C5Q8NGB2 326 aa6.19□□□□□ -1.42
PDLIM5-209ENST00000506632 PTH2Q96A98 100 aa6.19□□□□□ -1.42
PDLIM5-209ENST00000506632 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 RYR1P21817 5038 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 FAM74A7A6NL05 159 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 C9JCJ5 164 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 RS1O15537 224 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 RNASE3P12724 160 aaKnown RBP6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 GYPEP15421 78 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 GATA1P15976 413 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 SRIP30626 198 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 ZNF345Q14585 488 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 ZFP69Q49AA0 526 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 SAPCD1Q5SSQ6 148 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 AKR1C8PQ5T2L2 129 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 DPPA3Q6W0C5 159 aa6.18□□□□□ -1.42
PDLIM5-209ENST00000506632 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms