RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CYTL1Q9NRR1 136 aa11.44□□□□□ -0.58
PDLIM7-215ENST00000506161 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
PDLIM7-215ENST00000506161 HHLA3Q9XRX5 114 aa11.44□□□□□ -0.58
PDLIM7-215ENST00000506161 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
PDLIM7-215ENST00000506161 TRGV11A0A075B6L2 103 aa11.43□□□□□ -0.58
PDLIM7-215ENST00000506161 SUMO1P63165 101 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-215ENST00000506161 FAM74A1Q5RGS3 127 aa11.43□□□□□ -0.58
PDLIM7-215ENST00000506161 LYPD5Q6UWN5 251 aa11.43□□□□□ -0.58
PDLIM7-215ENST00000506161 DPPA3Q6W0C5 159 aa11.43□□□□□ -0.58
PDLIM7-215ENST00000506161 Q6ZRN7 208 aaPredicted RBP11.43□□□□□ -0.58
PDLIM7-215ENST00000506161 C5orf17Q8NAS9 161 aa11.43□□□□□ -0.58
PDLIM7-215ENST00000506161 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
PDLIM7-215ENST00000506161 HERC1Q15751 4861 aa11.42□□□□□ -0.58
PDLIM7-215ENST00000506161 TRAV21A0A0B4J279 112 aa11.42□□□□□ -0.58
PDLIM7-215ENST00000506161 NXPH4O95158 308 aa11.42□□□□□ -0.58
PDLIM7-215ENST00000506161 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
PDLIM7-215ENST00000506161 SERF2P84101 59 aa11.42□□□□□ -0.58
PDLIM7-215ENST00000506161 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
PDLIM7-215ENST00000506161 DNAH5Q8TE73 4624 aa11.42□□□□□ -0.58
PDLIM7-215ENST00000506161 TRAV34A0A0B4J273 112 aa11.41□□□□□ -0.58
PDLIM7-215ENST00000506161 K7EQD1 137 aa11.41□□□□□ -0.58
PDLIM7-215ENST00000506161 CDK2AP2O75956 126 aa11.41□□□□□ -0.58
PDLIM7-215ENST00000506161 FGF8P55075 233 aaPredicted RBP11.41□□□□□ -0.58
PDLIM7-215ENST00000506161 LINC00315P59091 139 aa11.41□□□□□ -0.58
PDLIM7-215ENST00000506161 SPXQ9BT56 116 aa11.41□□□□□ -0.58
PDLIM7-215ENST00000506161 EPDR1Q9UM22 224 aa11.41□□□□□ -0.58
PDLIM7-215ENST00000506161 TRGV4A0A0C4DH28 118 aa11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 CXorf1O96002 111 aa11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 GCGP01275 180 aa11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 GYPEP15421 78 aa11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 FLI1Q01543 452 aaPredicted RBP11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 PRNTQ86SH4 94 aa11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 WFDC10BQ8IUB3 73 aa11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 IQCF2Q8IXL9 164 aa11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 ACTR3CQ9C0K3 210 aaPredicted RBP11.4□□□□□ -0.58
PDLIM7-215ENST00000506161 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
PDLIM7-215ENST00000506161 M0R2P5 195 aa11.39□□□□□ -0.59
PDLIM7-215ENST00000506161 SIVA1O15304 175 aa11.39□□□□□ -0.59
PDLIM7-215ENST00000506161 ARPC5O15511 151 aa11.39□□□□□ -0.59
PDLIM7-215ENST00000506161 UBE2G2P60604 165 aa11.39□□□□□ -0.59
PDLIM7-215ENST00000506161 RGS21Q2M5E4 152 aa11.39□□□□□ -0.59
PDLIM7-215ENST00000506161 INO80EQ8NBZ0 244 aaPredicted RBP11.39□□□□□ -0.59
PDLIM7-215ENST00000506161 ASB13Q8WXK3 278 aa11.39□□□□□ -0.59
PDLIM7-215ENST00000506161 A0A1W2PPQ1 181 aa11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 MBP02144 154 aa11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 MRPL23Q16540 153 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 TTC32Q5I0X7 151 aa11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 OR11H4Q8NGC9 324 aa11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 C9orf85Q96MD7 179 aa11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
PDLIM7-215ENST00000506161 IGKV3D-20A0A0C4DH25 116 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 CTXND1A0A1B0GTU2 59 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 C16orf90A8MZG2 172 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 FHITP49789 147 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 Q8N1X5 172 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 CYB561D1Q8N8Q1 229 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 OR4C5Q8NGB2 326 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
PDLIM7-215ENST00000506161 APOBP04114 4563 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 BORCS7-ASMTA0A0B4J1R7 106 aa11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 A0A1W2PRE2 83 aa11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 C9JCJ5 164 aa11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 GATA1P15976 413 aaPredicted RBP11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 SLAQ13239 276 aa11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 NEGR1Q7Z3B1 354 aa11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 ARL2-SNX15V9GYD0 113 aa11.36□□□□□ -0.59
PDLIM7-215ENST00000506161 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
PDLIM7-215ENST00000506161 RS1O15537 224 aa11.35□□□□□ -0.59
PDLIM7-215ENST00000506161 PFN1P07737 140 aaKnown RBP11.35□□□□□ -0.59
PDLIM7-215ENST00000506161 CRIP1P50238 77 aa11.35□□□□□ -0.59
PDLIM7-215ENST00000506161 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
PDLIM7-215ENST00000506161 SRIP30626 198 aa11.34□□□□□ -0.59
PDLIM7-215ENST00000506161 SMUG1Q53HV7 270 aa11.34□□□□□ -0.59
PDLIM7-215ENST00000506161 ZNF506Q5JVG8 444 aa11.34□□□□□ -0.59
PDLIM7-215ENST00000506161 CFAP126Q5VTH2 177 aa11.34□□□□□ -0.59
PDLIM7-215ENST00000506161 Q6ZSN1 163 aa11.34□□□□□ -0.59
PDLIM7-215ENST00000506161 Q86TA4 180 aa11.34□□□□□ -0.59
PDLIM7-215ENST00000506161 KCNS1Q96KK3 526 aa11.34□□□□□ -0.59
PDLIM7-215ENST00000506161 PEX7O00628 323 aa11.33□□□□□ -0.6
PDLIM7-215ENST00000506161 ZNF876PQ49A33 203 aa11.33□□□□□ -0.6
PDLIM7-215ENST00000506161 JPT2Q9H910 190 aa11.33□□□□□ -0.6
PDLIM7-215ENST00000506161 Q9UF83 564 aa11.33□□□□□ -0.6
PDLIM7-215ENST00000506161 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 TAAR5O14804 337 aa11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 DNAH10OSP0CZ25 163 aa11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 BTF3P20290 206 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 AKR1C8PQ5T2L2 129 aa11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 SLC25A29Q8N8R3 303 aa11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 ZC2HC1AQ96GY0 325 aa11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 MAP1LC3BQ9GZQ8 125 aa11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 SCRT2Q9NQ03 307 aa11.32□□□□□ -0.6
PDLIM7-215ENST00000506161 K7EQM0 130 aa11.31□□□□□ -0.6
PDLIM7-215ENST00000506161 IFNA7P01567 189 aa11.31□□□□□ -0.6
PDLIM7-215ENST00000506161 ORM1P02763 201 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms