RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TRAV12-3A0A0B4J271 114 aa7.34□□□□□ -1.23
NR1I3-222ENST00000506018 PLAC8L1A1L4L8 177 aa7.34□□□□□ -1.23
NR1I3-222ENST00000506018 RBAKDNA6NC62 111 aa7.34□□□□□ -1.23
NR1I3-222ENST00000506018 GGTLC3B5MD39 225 aa7.34□□□□□ -1.23
NR1I3-222ENST00000506018 PRAC2D3DTV9 90 aa7.34□□□□□ -1.23
NR1I3-222ENST00000506018 PRB4P10163 310 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-222ENST00000506018 UBE2G1P62253 170 aa7.34□□□□□ -1.23
NR1I3-222ENST00000506018 CYB561D1Q8N8Q1 229 aa7.34□□□□□ -1.23
NR1I3-222ENST00000506018 DNAH10Q8IVF4 4471 aa7.34□□□□□ -1.23
NR1I3-222ENST00000506018 DIRC3C9JPN6 131 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 PEX7O00628 323 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 TCRAP04437 139 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 SRP19P09132 144 aaKnown RBP7.33□□□□□ -1.24
NR1I3-222ENST00000506018 CT45A10P0DMU9 189 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 AKR1C3P42330 323 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 OR5I1Q13606 314 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 TMEM78Q5T7P6 136 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 FMC1Q96HJ9 113 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
NR1I3-222ENST00000506018 RPH3ALQ9UNE2 315 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 C7orf71A4D174 169 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 M0R3E3 92 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 GPX1P07203 203 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 CEBPGP53567 150 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 C1orf134Q5TEV5 83 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 TMEM75Q8N9X5 138 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 C11orf52Q96A22 123 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 NDFIP1Q9BT67 221 aa7.33□□□□□ -1.24
NR1I3-222ENST00000506018 SCO2A0A1W2PP80 73 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 GAGE12BA1L429 117 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 KRBOX1C9JBD0 128 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 GAGE7O76087 117 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 GAGE12FP0CL80 117 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 GAGE12GP0CL81 117 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 GAGE12IP0CL82 117 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 DAZ2Q13117 558 aaKnown RBP7.32□□□□□ -1.24
NR1I3-222ENST00000506018 KIR3DS1Q14943 382 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 SAPCD1Q5SSQ6 148 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 Q6ZR54 194 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 C9orf47Q6ZRZ4 202 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 GOLT1AQ6ZVE7 132 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 BIN3Q9NQY0 253 aa7.32□□□□□ -1.24
NR1I3-222ENST00000506018 TRBV6-1A0A0K0K1D8 114 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 TMEM218A2RU14 115 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 KLLNB2CW77 178 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 F8W036 122 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 RTL8CO15255 209 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 SFTA3P0C7M3 94 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 RNASE4P34096 147 aaKnown RBP7.31□□□□□ -1.24
NR1I3-222ENST00000506018 RPL35P42766 123 aaKnown RBP7.31□□□□□ -1.24
NR1I3-222ENST00000506018 SRSF3P84103 164 aaKnown RBP7.31□□□□□ -1.24
NR1I3-222ENST00000506018 FLI1Q01543 452 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-222ENST00000506018 ERCC8Q13216 396 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 TMEM183BQ1AE95 376 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 ZNF674Q2M3X9 581 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 SMIM12Q96EX1 92 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 SMIM7Q9BQ49 75 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 SEC11CQ9BY50 192 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 PARLQ9H300 379 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 ZFP30Q9Y2G7 519 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 KLF12Q9Y4X4 402 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 LENEPQ9Y5L5 61 aa7.31□□□□□ -1.24
NR1I3-222ENST00000506018 TRGV2A0A075B6R0 118 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 TRAV26-1A0A087WT03 109 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 TRBV7-9A0A0J9YWB2 115 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 C9JCJ5 164 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 H3BNG1 76 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 CRISP2P16562 243 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 GNG4P50150 75 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 ZNF138P52744 262 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 GNG5P63218 68 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 ANXA2RQ3ZCQ2 193 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 SLC7A5P1Q8MH63 180 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 LINC00612Q8N6U2 182 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 LINC00467Q9BRT7 94 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 AGPAT4-IT1Q9H0P7 198 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 PSG8Q9UQ74 426 aa7.3□□□□□ -1.24
NR1I3-222ENST00000506018 HECTD4Q9Y4D8 3996 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 IGKV2-40A0A087WW87 121 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-222ENST00000506018 NBDYA0A0U1RRE5 68 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 IGKV2D-40P01614 121 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-222ENST00000506018 PNRC1Q12796 327 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-222ENST00000506018 BTN1A1Q13410 526 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 TMEM241Q24JQ0 296 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 BAGE2Q86Y30 109 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 FAM19A4Q96LR4 140 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 ZNF492Q9P255 531 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 NAT8Q9UHE5 227 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 LY96Q9Y6Y9 160 aa7.29□□□□□ -1.24
NR1I3-222ENST00000506018 TRGV1A0A0A0MS02 117 aa7.28□□□□□ -1.24
NR1I3-222ENST00000506018 A0A0J9YY99 117 aa7.28□□□□□ -1.24
NR1I3-222ENST00000506018 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
NR1I3-222ENST00000506018 ZNF324O75467 553 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-222ENST00000506018 IBA57Q5T440 356 aaKnown RBP7.28□□□□□ -1.24
NR1I3-222ENST00000506018 PRNTQ86SH4 94 aa7.28□□□□□ -1.24
NR1I3-222ENST00000506018 ZNRF2Q8NHG8 242 aa7.28□□□□□ -1.24
NR1I3-222ENST00000506018 C18orf15Q96N68 181 aa7.28□□□□□ -1.24
NR1I3-222ENST00000506018 GSN-AS1Q9NRJ2 163 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms