RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MDFICQ9P1T7 246 aa11.72□□□□□ -0.53
SCLT1-205ENST00000503401 SACSQ9NZJ4 4579 aa11.72□□□□□ -0.53
SCLT1-205ENST00000503401 TEX48A0A1B0GUV7 120 aa11.71□□□□□ -0.53
SCLT1-205ENST00000503401 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
SCLT1-205ENST00000503401 RBFOX3A6NFN3 312 aa11.71□□□□□ -0.53
SCLT1-205ENST00000503401 PDE6DO43924 150 aa11.71□□□□□ -0.53
SCLT1-205ENST00000503401 ATP6V1G1O75348 118 aa11.71□□□□□ -0.53
SCLT1-205ENST00000503401 TYMSP04818 313 aa11.71□□□□□ -0.54
SCLT1-205ENST00000503401 S100A9P06702 114 aaKnown RBP11.71□□□□□ -0.54
SCLT1-205ENST00000503401 HTN3P15516 51 aa11.71□□□□□ -0.54
SCLT1-205ENST00000503401 TCL1AP56279 114 aa11.71□□□□□ -0.54
SCLT1-205ENST00000503401 TDRG1Q3Y452 100 aa11.71□□□□□ -0.54
SCLT1-205ENST00000503401 TOR2AQ5JU69 321 aa11.71□□□□□ -0.54
SCLT1-205ENST00000503401 BAGE2Q86Y30 109 aa11.71□□□□□ -0.54
SCLT1-205ENST00000503401 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
SCLT1-205ENST00000503401 RAB19A4D1S5 217 aa11.7□□□□□ -0.54
SCLT1-205ENST00000503401 TAGLN2P37802 199 aaKnown RBP11.7□□□□□ -0.54
SCLT1-205ENST00000503401 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
SCLT1-205ENST00000503401 IBA57Q5T440 356 aaKnown RBP11.7□□□□□ -0.54
SCLT1-205ENST00000503401 Q6ZTI0 123 aa11.7□□□□□ -0.54
SCLT1-205ENST00000503401 TRGV11A0A075B6L2 103 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 TRAV10A0A0B4J240 114 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 GAGE12BA1L429 117 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 SH2D1AO60880 128 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 GAGE7O76087 117 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 GAGE12FP0CL80 117 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 GAGE12GP0CL81 117 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 GAGE12IP0CL82 117 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 DAZ2Q13117 558 aaKnown RBP11.69□□□□□ -0.54
SCLT1-205ENST00000503401 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 COX8CQ7Z4L0 72 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 SDF2L1Q9HCN8 221 aa11.69□□□□□ -0.54
SCLT1-205ENST00000503401 TRGV1A0A0A0MS02 117 aa11.68□□□□□ -0.54
SCLT1-205ENST00000503401 IGHV3-16A0A0C4DH30 117 aa11.68□□□□□ -0.54
SCLT1-205ENST00000503401 FAM162BQ5T6X4 162 aa11.68□□□□□ -0.54
SCLT1-205ENST00000503401 KCNS1Q96KK3 526 aa11.68□□□□□ -0.54
SCLT1-205ENST00000503401 MLST8Q9BVC4 326 aa11.68□□□□□ -0.54
SCLT1-205ENST00000503401 EIF5A2Q9GZV4 153 aaKnown RBP11.68□□□□□ -0.54
SCLT1-205ENST00000503401 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
SCLT1-205ENST00000503401 M0R036 132 aa11.68□□□□□ -0.54
SCLT1-205ENST00000503401 ZNF674Q2M3X9 581 aa11.68□□□□□ -0.54
SCLT1-205ENST00000503401 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
SCLT1-205ENST00000503401 KLK5Q9Y337 293 aaPredicted RBP11.68□□□□□ -0.54
SCLT1-205ENST00000503401 DNAH1Q9P2D7 4330 aa11.67□□□□□ -0.54
SCLT1-205ENST00000503401 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
SCLT1-205ENST00000503401 PGPEP1LA6NFU8 196 aa11.67□□□□□ -0.54
SCLT1-205ENST00000503401 IGLL5B9A064 214 aa11.67□□□□□ -0.54
SCLT1-205ENST00000503401 ORM1P02763 201 aa11.67□□□□□ -0.54
SCLT1-205ENST00000503401 NDUFA5Q16718 116 aa11.67□□□□□ -0.54
SCLT1-205ENST00000503401 PRR27Q6MZM9 219 aa11.67□□□□□ -0.54
SCLT1-205ENST00000503401 LINC00612Q8N6U2 182 aa11.67□□□□□ -0.54
SCLT1-205ENST00000503401 MUC4Q99102 2169 aa11.66□□□□□ -0.54
SCLT1-205ENST00000503401 SPINK4O60575 86 aa11.66□□□□□ -0.54
SCLT1-205ENST00000503401 CEBPGP53567 150 aa11.66□□□□□ -0.54
SCLT1-205ENST00000503401 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
SCLT1-205ENST00000503401 B4DEV8 164 aa11.65□□□□□ -0.54
SCLT1-205ENST00000503401 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
SCLT1-205ENST00000503401 GNG4P50150 75 aa11.65□□□□□ -0.54
SCLT1-205ENST00000503401 TRGV2A0A075B6R0 118 aa11.64□□□□□ -0.55
SCLT1-205ENST00000503401 TMSB15BA0A087X1C1 80 aa11.64□□□□□ -0.55
SCLT1-205ENST00000503401 MGST1P10620 155 aaKnown RBP11.64□□□□□ -0.55
SCLT1-205ENST00000503401 KRBOX1C9JBD0 128 aa11.64□□□□□ -0.55
SCLT1-205ENST00000503401 ATP5G1P05496 136 aa11.64□□□□□ -0.55
SCLT1-205ENST00000503401 PARLQ9H300 379 aa11.64□□□□□ -0.55
SCLT1-205ENST00000503401 VPS13DQ5THJ4 4388 aa11.63□□□□□ -0.55
SCLT1-205ENST00000503401 IGHV4-4A0A075B6R2 117 aa11.63□□□□□ -0.55
SCLT1-205ENST00000503401 GRIFINA4D1Z8 144 aa11.63□□□□□ -0.55
SCLT1-205ENST00000503401 F5H768 121 aa11.63□□□□□ -0.55
SCLT1-205ENST00000503401 TMEM250H0YL14 139 aa11.63□□□□□ -0.55
SCLT1-205ENST00000503401 RNASE3P12724 160 aaKnown RBP11.63□□□□□ -0.55
SCLT1-205ENST00000503401 RPL19P84098 196 aaKnown RBP11.63□□□□□ -0.55
SCLT1-205ENST00000503401 ZNF575Q86XF7 245 aa11.63□□□□□ -0.55
SCLT1-205ENST00000503401 SLC7A5P1Q8MH63 180 aa11.63□□□□□ -0.55
SCLT1-205ENST00000503401 SPXQ9BT56 116 aa11.63□□□□□ -0.55
SCLT1-205ENST00000503401 IGHV3-53P01767 116 aa11.62□□□□□ -0.55
SCLT1-205ENST00000503401 SRSF3P84103 164 aaKnown RBP11.62□□□□□ -0.55
SCLT1-205ENST00000503401 LGALS9BQ3B8N2 356 aa11.62□□□□□ -0.55
SCLT1-205ENST00000503401 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
SCLT1-205ENST00000503401 NACAE9PAV3 2078 aa11.62□□□□□ -0.55
SCLT1-205ENST00000503401 M0R2P5 195 aa11.61□□□□□ -0.55
SCLT1-205ENST00000503401 SRP19P09132 144 aaKnown RBP11.61□□□□□ -0.55
SCLT1-205ENST00000503401 HOXA5P20719 270 aa11.61□□□□□ -0.55
SCLT1-205ENST00000503401 S100A4P26447 101 aaKnown RBP11.61□□□□□ -0.55
SCLT1-205ENST00000503401 ASIPP42127 132 aa11.61□□□□□ -0.55
SCLT1-205ENST00000503401 OR5I1Q13606 314 aa11.61□□□□□ -0.55
SCLT1-205ENST00000503401 TMEM88Q6PEY1 159 aa11.61□□□□□ -0.55
SCLT1-205ENST00000503401 COMMD7Q86VX2 200 aa11.61□□□□□ -0.55
SCLT1-205ENST00000503401 C9orf85Q96MD7 179 aa11.61□□□□□ -0.55
SCLT1-205ENST00000503401 HYDINQ4G0P3 5121 aa11.61□□□□□ -0.55
SCLT1-205ENST00000503401 C9JCJ5 164 aa11.6□□□□□ -0.55
SCLT1-205ENST00000503401 C9JQL5 133 aa11.6□□□□□ -0.55
SCLT1-205ENST00000503401 H3BVH4 76 aa11.6□□□□□ -0.55
SCLT1-205ENST00000503401 RASL10AQ92737 203 aa11.6□□□□□ -0.55
SCLT1-205ENST00000503401 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
SCLT1-205ENST00000503401 APLNQ9ULZ1 77 aa11.6□□□□□ -0.55
SCLT1-205ENST00000503401 K7EN84 100 aa11.59□□□□□ -0.55
SCLT1-205ENST00000503401 SFTA3P0C7M3 94 aa11.59□□□□□ -0.55
SCLT1-205ENST00000503401 ZNF876PQ49A33 203 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms