RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 LOXL1Q08397 574 aaPredicted RBP9.11□□□□□ -0.95
NUP54-202ENST00000502850 GAGE1Q13065 139 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 MUC21Q5SSG8 566 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 PRSS57Q6UWY2 283 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 GPHB5Q86YW7 130 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 DEFB125Q8N687 156 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 OR1N2Q8NGR9 330 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 MRAP2Q96G30 205 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 RHPN1-AS1Q9BWJ2 59 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 KLK15Q9H2R5 256 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 SMPXQ9UHP9 88 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 GOLT1BQ9Y3E0 138 aa9.11□□□□□ -0.95
NUP54-202ENST00000502850 A0A096LNJ9 63 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 H0Y8G0 127 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 TNFRSF6BO95407 300 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 NCR2O95944 276 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 PSMB8P28062 276 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 RPL11P62913 178 aaKnown RBP9.1□□□□□ -0.95
NUP54-202ENST00000502850 APRG1Q8IVJ8 170 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 OR8A1Q8NGG7 326 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 IFI27L1Q96BM0 104 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 C20orf173Q96LM9 149 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 ITPR3Q14573 2671 aa9.1□□□□□ -0.95
NUP54-202ENST00000502850 hDV102S1A0JD36 115 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 PRSS47A8MTI9 375 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 SMKR1H3BMG3 65 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 AVPP01185 164 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 FCER1GP30273 86 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 ASIPP42127 132 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 DEFB112Q30KQ8 113 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 Q8N8P6 123 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 FAM19A4Q96LR4 140 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 BEX4Q9NWD9 120 aaPredicted RBP9.09□□□□□ -0.95
NUP54-202ENST00000502850 C11orf21Q9P2W6 132 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.09□□□□□ -0.952e-7■■■■■ 42.4
NUP54-202ENST00000502850 C2CD3Q4AC94 2353 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 A0A096LNT2 108 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 ZNF25P17030 456 aaPredicted RBP9.09□□□□□ -0.95
NUP54-202ENST00000502850 C12orf54Q6X4T0 127 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 ZFAND2AQ8N6M9 145 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 OR2K2Q8NGT1 345 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 MSRB1Q9NZV6 116 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 VPREB3Q9UKI3 123 aa9.09□□□□□ -0.95
NUP54-202ENST00000502850 AKAP9Q99996 3911 aa9.08□□□□□ -0.96
NUP54-202ENST00000502850 TGFAP01135 160 aa9.08□□□□□ -0.96
NUP54-202ENST00000502850 IGHV4-59P01825 116 aa9.08□□□□□ -0.96
NUP54-202ENST00000502850 COX8AP10176 69 aa9.08□□□□□ -0.96
NUP54-202ENST00000502850 S100A4P26447 101 aaKnown RBP9.08□□□□□ -0.96
NUP54-202ENST00000502850 TM4SF20Q53R12 229 aa9.08□□□□□ -0.96
NUP54-202ENST00000502850 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
NUP54-202ENST00000502850 H3BVH4 76 aa9.07□□□□□ -0.96
NUP54-202ENST00000502850 K7EMI3 77 aa9.07□□□□□ -0.96
NUP54-202ENST00000502850 DLEU1O43261 78 aa9.07□□□□□ -0.96
NUP54-202ENST00000502850 ATP5LO75964 103 aa9.07□□□□□ -0.96
NUP54-202ENST00000502850 PPP1R17O96001 155 aa9.07□□□□□ -0.96
NUP54-202ENST00000502850 ELANEP08246 267 aa9.07□□□□□ -0.96
NUP54-202ENST00000502850 DEFB113Q30KQ7 82 aa9.07□□□□□ -0.96
NUP54-202ENST00000502850 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
NUP54-202ENST00000502850 HINT1P49773 126 aaPredicted RBP9.06□□□□□ -0.96
NUP54-202ENST00000502850 PRR9Q5T870 116 aa9.06□□□□□ -0.96
NUP54-202ENST00000502850 Q6ZS46 218 aa9.06□□□□□ -0.96
NUP54-202ENST00000502850 STPG4Q8N801 248 aa9.06□□□□□ -0.96
NUP54-202ENST00000502850 TMEM208Q9BTX3 173 aa9.06□□□□□ -0.96
NUP54-202ENST00000502850 DPH3P1Q9H4G8 78 aa9.06□□□□□ -0.96
NUP54-202ENST00000502850 PHLDA3Q9Y5J5 127 aa9.06□□□□□ -0.96
NUP54-202ENST00000502850 M0R381 172 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 FSHBP01225 129 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 EVI2AP22794 236 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 G0S2P27469 103 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 LEPP41159 167 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 ORAOV1Q8WV07 137 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 LGALS9O00182 355 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 LGALS1P09382 135 aaKnown RBP9.05□□□□□ -0.96
NUP54-202ENST00000502850 SNRPD3P62318 126 aaKnown RBP9.05□□□□□ -0.96
NUP54-202ENST00000502850 LAGE3Q14657 143 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 Q6YL49 198 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 TEX29Q8N6K0 151 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 NRACQ8N912 160 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 AP1S3Q96PC3 154 aa9.05□□□□□ -0.96
NUP54-202ENST00000502850 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
NUP54-202ENST00000502850 ACANP16112 2415 aa9.04□□□□□ -0.96
NUP54-202ENST00000502850 IGLV2-18A0A075B6J9 118 aa9.04□□□□□ -0.96
NUP54-202ENST00000502850 KLLNB2CW77 178 aa9.04□□□□□ -0.96
NUP54-202ENST00000502850 FOSL1P15407 271 aa9.04□□□□□ -0.96
NUP54-202ENST00000502850 LCNL1Q6ZST4 164 aa9.04□□□□□ -0.96
NUP54-202ENST00000502850 DCANP1Q8TF63 244 aa9.04□□□□□ -0.96
NUP54-202ENST00000502850 C20orf78Q9BR46 151 aa9.04□□□□□ -0.96
NUP54-202ENST00000502850 SETD2Q9BYW2 2564 aaPredicted RBP9.03□□□□□ -0.96
NUP54-202ENST00000502850 SIVA1O15304 175 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 NXPH4O95158 308 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 IGHV4-31P0DP07 118 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 RNASE4P34096 147 aaKnown RBP9.03□□□□□ -0.96
NUP54-202ENST00000502850 TMEM95Q3KNT9 176 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 ANXA2RQ3ZCQ2 193 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 ORMDL2Q53FV1 153 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 OR9G4Q8NGQ1 327 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 MYOZ3Q8TDC0 251 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 MTORP42345 2549 aa9.03□□□□□ -0.96
NUP54-202ENST00000502850 RNF223E7ERA6 249 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 340.6 ms