RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ZNF497Q6ZNH5 498 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 FLYWCH2Q96CP2 140 aaKnown RBP4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 AMMECR1Q9Y4X0 333 aaPredicted RBP4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 ARHGAP32A7KAX9 2087 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 IGKV1D-17A0A075B6S4 117 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 TCL1BO95988 128 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 IGLV1-44P01699 117 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 ZNF329Q86UD4 541 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 FBXL15Q9H469 300 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 X6R8D5 127 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 LOC107984156A0A0G2JMH3 177 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 D6R8Y8 96 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 ELANEP08246 267 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 IFITM1P13164 125 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 HLA-DRB4P13762 266 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 CCL3L1P16619 93 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 LINC00596Q86U02 117 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 ARL17AQ8IVW1 177 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 ODF3Q96PU9 254 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 PLEKHA3Q9HB20 300 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 HLA-DRB4X5D2U9 266 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 IGHV3-72A0A0B4J1Y9 119 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 TMEM213A2RRL7 107 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 LINC01549A6NIU2 74 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 ERVK-16P61578 105 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 C4orf26Q17RF5 130 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 KIR2DL5BQ8NHK3 375 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 RPEQ96AT9 228 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 ZNF414Q96IQ9 312 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 TXNDC17Q9BRA2 123 aa4.52□□□□□ -1.69
SOX2-OT-218ENST00000498731 APELAP0DMC3 54 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 COX7A1P24310 79 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 GAGE2BQ13066 116 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 GAGE2EQ4V326 116 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 S1PR3Q99500 378 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 GAGE2DQ9UEU5 116 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 SRRM5B3KS81 715 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 PEX7O00628 323 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 ZNF688P0C7X2 276 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 CDSNQ15517 529 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 LGALS9BQ3B8N2 356 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 LGALS9CQ6DKI2 356 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 RASL11AQ6T310 242 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 TRPT1Q86TN4 253 aaKnown RBP4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 AMN1Q8IY45 258 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 CALYQ9NYX4 217 aa4.51□□□□□ -1.69
SOX2-OT-218ENST00000498731 NDUFB3O43676 98 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 UBE2L3P68036 154 aaKnown RBP4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 SLC25A33Q9BSK2 321 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 PRSS22Q9GZN4 317 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 RPP21Q9H633 154 aaKnown RBP4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 TRBV7-3A0A075B6L6 115 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 TRAV40A0A0B4J280 105 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 E7EQL1 145 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 GATA1P15976 413 aaPredicted RBP4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 LYPD2Q6UXB3 125 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 PATE2Q6UY27 113 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 FAM231DQ6ZW35 169 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 IFI27L1Q96BM0 104 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 MRPL36Q9P0J6 103 aaKnown RBP4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 V9GYY9 64 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 VCYO14598 125 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 TEN1Q86WV5 123 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 ENY2Q9NPA8 101 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 HIGD1BQ9P298 99 aa4.5□□□□□ -1.69
SOX2-OT-218ENST00000498731 TEX49A0A1B0GTD5 131 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 C19orf71A6NCJ1 209 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 PPP1R27Q86WC6 154 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 PPDPFLQ8WWR9 84 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 RNASE6Q93091 150 aaKnown RBP4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 TMEM101Q96IK0 257 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 HIST1H4GQ99525 98 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 MLST8Q9BVC4 326 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 DSCAMO60469 2012 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 APCP25054 2843 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 TRAV8-2A0A0B4J237 113 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 NPYP01303 97 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 IGFBPL1Q8WX77 278 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 PLEKHB2Q96CS7 222 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 RITA1Q96K30 269 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 ANKRD17O75179 2603 aaKnown RBP4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 USP17L23D6RBM5 183 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 EIF4EBP3O60516 100 aaPredicted RBP4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 MYCNOSP40205 109 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 TMEM78Q5T7P6 136 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 ZNF493Q6ZR52 646 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 LINC00336Q6ZUF6 198 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 ATP5L2Q7Z4Y8 100 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 RASL11BQ9BPW5 248 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 MAP1LC3AQ9H492 121 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 MDFICQ9P1T7 246 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 EPDR1Q9UM22 224 aa4.49□□□□□ -1.69
SOX2-OT-218ENST00000498731 FSTL3O95633 263 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 EFNA4P52798 201 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 C15orf53Q8NAA6 179 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 PSMG3-AS1Q96PY0 264 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 E7EUB6 86 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 TMEM262E9PQX1 116 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 P01737 135 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms