RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TMEM133Q9H2Q1 129 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 HES4Q9HCC6 221 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 NPVFQ9HCQ7 196 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 CMC2Q9NRP2 79 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 CISHQ9NSE2 258 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 TVP23BQ9NYZ1 205 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 SS18L2Q9UHA2 77 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 LAMTOR3Q9UHA4 124 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 VPREB3Q9UKI3 123 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 NXT1Q9UKK6 140 aaKnown RBP1.4□□□□□ -2.19
CBX3-208ENST00000497498 PCTPQ9UKL6 214 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 CES1P1Q9UKY3 287 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 ZNF257Q9Y2Q1 563 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 MED31Q9Y3C7 131 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 TRAPPC1Q9Y5R8 145 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 S4R3C0 116 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 V9GYY9 64 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 CITO14578 2027 aa1.4□□□□□ -2.19
CBX3-208ENST00000497498 CHD3Q12873 2000 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 VWA8A3KMH1 1905 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 HELZP42694 1942 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 IGKV3D-11A0A0A0MRZ8 115 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 MDFIC2A0A1B0GVS7 189 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 A0A1W2PPM0 123 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 MYBPHLA2RUH7 354 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 DPRXA6NFQ7 191 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ZNF727A8MUV8 499 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 FNDC10F2Z333 226 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 F5H5K5 113 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 F5H768 121 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 YPEL1O60688 119 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 PITX3O75364 302 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 SNCGO76070 127 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 OR2H2O95918 312 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 NCR2O95944 276 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 CA2P00918 260 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 TNFP01375 233 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 KLK1P06870 262 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 GPX1P07203 203 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 SPINK8P0C7L1 97 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ZNF728P0DKX0 622 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 BCL2P10415 239 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 IFITM1P13164 125 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 COX6B1P14854 86 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 OPRM1P35372 400 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 G6PCP35575 357 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 PSMB3P49720 205 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ATP5J2P56134 94 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 KRTDAPP60985 99 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 HSPE1P61604 102 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 RPS24P62847 133 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 RPL38P63173 70 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 BTG2P78543 158 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 SERF2P84101 59 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 TNFAIP6P98066 277 aaPredicted RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 PSG9Q00887 426 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ZNF117Q03924 483 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ADIGQ0VDE8 80 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 FUT5Q11128 374 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 EIF3IQ13347 325 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 CDK5R1Q15078 307 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 TNXAQ16473 311 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 BVES-AS1Q5T3Y7 98 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 HES3Q5TGS1 186 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 NCBP2-AS2Q69YL0 99 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 RPL7L1Q6DKI1 246 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 TMEM136Q6ZRR5 245 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 SSX8Q7RTT4 187 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 BPIFA4PQ86YQ2 179 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ATOH7Q8N100 152 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 UMODL1-AS1Q8N2C9 162 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 MIR7-3HGQ8N6C7 128 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ZNF676Q8N7Q3 588 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ZIC4Q8N9L1 334 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 CDRT4Q8N9R6 151 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 OR5H2Q8NGV7 314 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 OR10AG1Q8NH19 301 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 OR51H1Q8NH63 302 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 FAM213BQ8TBF2 198 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 MRPL30Q8TCC3 161 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 C18orf32Q8TCD1 76 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 C2orf15Q8WU43 125 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 ZCCHC13Q8WW36 166 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 MAL2Q969L2 176 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 LSM10Q969L4 123 aaKnown RBP1.39□□□□□ -2.19
CBX3-208ENST00000497498 FXYD5Q96DB9 178 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 YPEL2Q96QA6 119 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 SMIM7Q9BQ49 75 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 EBPLQ9BY08 206 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 GNB1LQ9BYB4 327 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 COMMD5Q9GZQ3 224 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 CHST6Q9GZX3 395 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 CHRNA10Q9GZZ6 450 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 NAA60Q9H7X0 242 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 SLC39A9Q9NUM3 307 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 ACER3Q9NUN7 267 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 CKLFQ9UBR5 152 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 PRO0628Q9UI54 55 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 POLR1DQ9Y2S0 133 aa1.39□□□□□ -2.19
CBX3-208ENST00000497498 SPCS1Q9Y6A9 102 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms