RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 NTN5Q8WTR8 489 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-215ENST00000497139 IGHV1-69DA0A0B4J2H0 117 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 IGHV1-3A0A0C4DH29 117 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 GFRALQ6UXV0 394 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 WDFY3Q8IZQ1 3526 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 M0R381 172 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 PPP1R17O96001 155 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 C2orf66Q6UXQ4 117 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 FAM57AQ8TBR7 257 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 CTSZQ9UBR2 303 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 CACNA1HO95180 2353 aa9.97□□□□□ -0.81
VEGFA-215ENST00000497139 TRAV2A0A0B4J234 112 aa9.97□□□□□ -0.81
VEGFA-215ENST00000497139 TRAV26-2A0A0B4J265 109 aa9.97□□□□□ -0.81
VEGFA-215ENST00000497139 LINC01620Q4KN68 170 aa9.97□□□□□ -0.81
VEGFA-215ENST00000497139 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
VEGFA-215ENST00000497139 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
VEGFA-215ENST00000497139 LGALS9O00182 355 aa9.97□□□□□ -0.81
VEGFA-215ENST00000497139 LOXP28300 417 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-215ENST00000497139 ARRDC1-AS1Q9H2J1 176 aa9.97□□□□□ -0.81
VEGFA-215ENST00000497139 PLXNB1O43157 2135 aa9.96□□□□□ -0.81
VEGFA-215ENST00000497139 A0A1W2PNU3 283 aaPredicted RBP9.96□□□□□ -0.81
VEGFA-215ENST00000497139 C11orf86A6NJI1 115 aa9.96□□□□□ -0.81
VEGFA-215ENST00000497139 H3BMM0 161 aa9.96□□□□□ -0.81
VEGFA-215ENST00000497139 IGLV1-47P01700 117 aa9.96□□□□□ -0.81
VEGFA-215ENST00000497139 SPANXN1Q5VSR9 72 aa9.96□□□□□ -0.81
VEGFA-215ENST00000497139 DYNAPQ8N1N2 210 aa9.96□□□□□ -0.81
VEGFA-215ENST00000497139 UBE2WQ96B02 151 aa9.96□□□□□ -0.81
VEGFA-215ENST00000497139 SPANXCQ9NY87 97 aa9.96□□□□□ -0.81
VEGFA-215ENST00000497139 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
VEGFA-215ENST00000497139 TIMM23O14925 209 aa9.96□□□□□ -0.82
VEGFA-215ENST00000497139 KAAG1Q9UBP8 84 aa9.96□□□□□ -0.82
VEGFA-215ENST00000497139 SMAD5-AS1Q9Y6J3 95 aa9.96□□□□□ -0.82
VEGFA-215ENST00000497139 INTS1Q8N201 2190 aaKnown RBP9.96□□□□□ -0.82
VEGFA-215ENST00000497139 ARFGEF3Q5TH69 2177 aa9.95□□□□□ -0.82
VEGFA-215ENST00000497139 Q6ZQT7 251 aa9.95□□□□□ -0.82
VEGFA-215ENST00000497139 KLHL30-AS1Q8NEE0 82 aa9.95□□□□□ -0.82
VEGFA-215ENST00000497139 NUP37Q8NFH4 326 aa9.95□□□□□ -0.82
VEGFA-215ENST00000497139 TMEM263Q8WUH6 116 aaKnown RBP9.95□□□□□ -0.82
VEGFA-215ENST00000497139 NRGNQ92686 78 aa9.95□□□□□ -0.82
VEGFA-215ENST00000497139 DUSP14O95147 198 aaKnown RBP9.95□□□□□ -0.82
VEGFA-215ENST00000497139 HES1Q14469 280 aa9.95□□□□□ -0.82
VEGFA-215ENST00000497139 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
VEGFA-215ENST00000497139 TMEM178BH3BS89 294 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 TGFAP01135 160 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 CRIP2P52943 208 aaPredicted RBP9.94□□□□□ -0.82
VEGFA-215ENST00000497139 TRPT1Q86TN4 253 aaKnown RBP9.94□□□□□ -0.82
VEGFA-215ENST00000497139 MRPL53Q96EL3 112 aaKnown RBP9.94□□□□□ -0.82
VEGFA-215ENST00000497139 LINC01587Q99440 93 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 IMUPQ9GZP8 106 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 KLK15Q9H2R5 256 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 SVILO95425 2214 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 FRYQ5TBA9 3013 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 IGLV4-69A0A075B6H9 119 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 IGLV11-55A0A075B6I3 123 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 BUB1B-PAK6H3BSN5 160 aa9.94□□□□□ -0.82
VEGFA-215ENST00000497139 TRBV30A0A0K0K1B3 111 aa9.93□□□□□ -0.82
VEGFA-215ENST00000497139 H3BT86 120 aa9.93□□□□□ -0.82
VEGFA-215ENST00000497139 DEFB121Q5J5C9 76 aa9.93□□□□□ -0.82
VEGFA-215ENST00000497139 C11orf21Q9P2W6 132 aa9.93□□□□□ -0.82
VEGFA-215ENST00000497139 MBD3L4A6NDZ8 208 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-215ENST00000497139 MBD3L3A6NE82 208 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-215ENST00000497139 MBD3L5A6NJ08 208 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-215ENST00000497139 FOXC1Q12948 553 aa9.93□□□□□ -0.82
VEGFA-215ENST00000497139 MBD3L2Q8NHZ7 208 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-215ENST00000497139 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
VEGFA-215ENST00000497139 C17orf100A8MU93 164 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 F8W735 103 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-215ENST00000497139 M0R2P5 195 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 CRYGDP07320 174 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 CCL8P80075 99 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 PMVKQ15126 192 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 PLA2G2CQ5R387 149 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 Q6ZS46 218 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 DPH3P1Q9H4G8 78 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 J3KRW8 73 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 C5orf47Q569G3 176 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 AMELXQ99217 191 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 C21orf62Q9NYP8 219 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 NBEAQ8NFP9 2946 aa9.92□□□□□ -0.82
VEGFA-215ENST00000497139 TEX49A0A1B0GTD5 131 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 A4D1N5 150 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 PRSS33Q8NF86 280 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 TMEM101Q96IK0 257 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 FANCD2OSQ96PS1 177 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 MED13Q9UHV7 2174 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 J3QQQ9 107 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 LGALS3P17931 250 aaKnown RBP9.91□□□□□ -0.82
VEGFA-215ENST00000497139 TMEM170BQ5T4T1 132 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 LYPD2Q6UXB3 125 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 PPDPFQ9H3Y8 114 aa9.91□□□□□ -0.82
VEGFA-215ENST00000497139 EP300Q09472 2414 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-215ENST00000497139 CDX4O14627 284 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-215ENST00000497139 TIMM17AQ99595 171 aa9.9□□□□□ -0.82
VEGFA-215ENST00000497139 AHCTF1Q8WYP5 2266 aa9.9□□□□□ -0.82
VEGFA-215ENST00000497139 A0A0J9YX75 114 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 PRAC2D3DTV9 90 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 RNF223E7ERA6 249 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 ATP5G1P05496 136 aa9.9□□□□□ -0.83
VEGFA-215ENST00000497139 MED14OSP0DP75 135 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms