RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 HINT1P49773 126 aaPredicted RBP12.69□□□□□ -0.38
LMNA-216ENST00000496738 WNK1Q9H4A3 2382 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 F6UB75 175 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 TMEM256Q8N2U0 113 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 SFRP2Q96HF1 295 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 RNASE7Q9H1E1 156 aaKnown RBP12.68□□□□□ -0.38
LMNA-216ENST00000496738 PAFAH1B2P68402 229 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 CD300EQ496F6 205 aaPredicted RBP12.68□□□□□ -0.38
LMNA-216ENST00000496738 RBPMS2Q6ZRY4 209 aaKnown RBP12.68□□□□□ -0.38
LMNA-216ENST00000496738 C8orf49Q96NF6 230 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 CITED1Q99966 193 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 PGPEP1Q9NXJ5 209 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 LY96Q9Y6Y9 160 aa12.68□□□□□ -0.38
LMNA-216ENST00000496738 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
LMNA-216ENST00000496738 TENM1Q9UKZ4 2725 aa12.67□□□□□ -0.38
LMNA-216ENST00000496738 K7EQG2 157 aa12.67□□□□□ -0.38
LMNA-216ENST00000496738 NUPR1O60356 82 aa12.67□□□□□ -0.38
LMNA-216ENST00000496738 TYMSP04818 313 aa12.67□□□□□ -0.38
LMNA-216ENST00000496738 PSMG4Q5JS54 123 aa12.67□□□□□ -0.38
LMNA-216ENST00000496738 IZUMO1RA6ND01 250 aa12.66□□□□□ -0.38
LMNA-216ENST00000496738 ID1P41134 155 aa12.66□□□□□ -0.38
LMNA-216ENST00000496738 SPATA45Q537H7 98 aa12.66□□□□□ -0.38
LMNA-216ENST00000496738 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
LMNA-216ENST00000496738 TSPOP30536 169 aa12.66□□□□□ -0.38
LMNA-216ENST00000496738 ZC2HC1AQ96GY0 325 aa12.65□□□□□ -0.38
LMNA-216ENST00000496738 MLST8Q9BVC4 326 aa12.65□□□□□ -0.38
LMNA-216ENST00000496738 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
LMNA-216ENST00000496738 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
LMNA-216ENST00000496738 LINC00322Q6ZN03 302 aaPredicted RBP12.64□□□□□ -0.39
LMNA-216ENST00000496738 OR10G8Q8NGN5 311 aa12.64□□□□□ -0.39
LMNA-216ENST00000496738 SPATA3Q8NHX4 192 aa12.64□□□□□ -0.39
LMNA-216ENST00000496738 TRBV6-1A0A0K0K1D8 114 aa12.63□□□□□ -0.39
LMNA-216ENST00000496738 SNRPD3P62318 126 aaKnown RBP12.63□□□□□ -0.39
LMNA-216ENST00000496738 IBA57Q5T440 356 aaKnown RBP12.63□□□□□ -0.39
LMNA-216ENST00000496738 LINC00482Q8N8I6 264 aa12.63□□□□□ -0.39
LMNA-216ENST00000496738 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
LMNA-216ENST00000496738 TMEM78Q5T7P6 136 aa12.63□□□□□ -0.39
LMNA-216ENST00000496738 PRR25Q96S07 402 aa12.63□□□□□ -0.39
LMNA-216ENST00000496738 ESDP10768 282 aa12.62□□□□□ -0.39
LMNA-216ENST00000496738 GDF5OSQ5U4N7 250 aa12.62□□□□□ -0.39
LMNA-216ENST00000496738 FER1L6-AS1Q8NA97 138 aa12.62□□□□□ -0.39
LMNA-216ENST00000496738 OR10J6PQ8NGY7 276 aa12.62□□□□□ -0.39
LMNA-216ENST00000496738 ATRQ13535 2644 aa12.62□□□□□ -0.39
LMNA-216ENST00000496738 CA1P00915 261 aaPredicted RBP12.62□□□□□ -0.39
LMNA-216ENST00000496738 KCNIP4Q6PIL6 250 aa12.61□□□□□ -0.39
LMNA-216ENST00000496738 Q8N976 141 aa12.61□□□□□ -0.39
LMNA-216ENST00000496738 OR8A1Q8NGG7 326 aa12.61□□□□□ -0.39
LMNA-216ENST00000496738 FBN1P35555 2871 aaKnown RBP12.61□□□□□ -0.39
LMNA-216ENST00000496738 ZNF138P52744 262 aa12.61□□□□□ -0.39
LMNA-216ENST00000496738 C9orf47Q6ZRZ4 202 aa12.61□□□□□ -0.39
LMNA-216ENST00000496738 TAX1BP3O14907 124 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 AZU1P20160 251 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 SIGLEC8Q9NYZ4 499 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 V9GYV3 84 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 IGKV3-20P01619 116 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 CRIP1P50238 77 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 AMMECR1LQ6DCA0 310 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 NDFIP1Q9BT67 221 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 ZNF492Q9P255 531 aa12.6□□□□□ -0.39
LMNA-216ENST00000496738 NPIPB6E9PJ23 425 aa12.59□□□□□ -0.39
LMNA-216ENST00000496738 CT45A10P0DMU9 189 aa12.59□□□□□ -0.39
LMNA-216ENST00000496738 ZNF80P51504 273 aaPredicted RBP12.59□□□□□ -0.39
LMNA-216ENST00000496738 DEFB131AP59861 70 aa12.59□□□□□ -0.39
LMNA-216ENST00000496738 CKS1BP61024 79 aa12.59□□□□□ -0.39
LMNA-216ENST00000496738 OSTCQ9NRP0 149 aa12.59□□□□□ -0.39
LMNA-216ENST00000496738 DAZAP1Q96EP5 407 aaKnown RBP12.59□□□□□ -0.39
LMNA-216ENST00000496738 FBLL1A6NHQ2 334 aaKnown RBP12.58□□□□□ -0.4
LMNA-216ENST00000496738 SPAG8Q99932 426 aaPredicted RBP12.58□□□□□ -0.4
LMNA-216ENST00000496738 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
LMNA-216ENST00000496738 C19orf71A6NCJ1 209 aa12.58□□□□□ -0.4
LMNA-216ENST00000496738 OR4C46A6NHA9 309 aa12.58□□□□□ -0.4
LMNA-216ENST00000496738 KNCNA6PVL3 124 aa12.58□□□□□ -0.4
LMNA-216ENST00000496738 TCL1AP56279 114 aa12.58□□□□□ -0.4
LMNA-216ENST00000496738 PET117Q6UWS5 81 aa12.58□□□□□ -0.4
LMNA-216ENST00000496738 ERASQ7Z444 233 aa12.58□□□□□ -0.4
LMNA-216ENST00000496738 C3orf56Q8N813 242 aa12.58□□□□□ -0.4
LMNA-216ENST00000496738 IGLV1-51P01701 117 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 P01737 135 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 FAM231DQ6ZW35 169 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 APRG1Q8IVJ8 170 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 MAP6D1Q9H9H5 199 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 IL36BQ9NZH7 164 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 A0A0J9YX75 114 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 SH2D1AO60880 128 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 LINC00310P59036 64 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 PRR9Q5T870 116 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 Q6ZQT7 251 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
LMNA-216ENST00000496738 SSBP4Q9BWG4 385 aaPredicted RBP12.57□□□□□ -0.4
LMNA-216ENST00000496738 TRAV2A0A0B4J234 112 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 TRAV25A0A0B4J276 109 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 EBLN2Q6P2I7 272 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 SIGMAR1Q99720 223 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 KIR3DS1Q14943 382 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 C12orf54Q6X4T0 127 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 ZNF747Q9BV97 191 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 RPP21Q9H633 154 aaKnown RBP12.56□□□□□ -0.4
LMNA-216ENST00000496738 TP53TG3Q9ULZ0 132 aa12.56□□□□□ -0.4
LMNA-216ENST00000496738 SMAGPQ0VAQ4 97 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 635.7 ms