RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 EFCAB1Q9HAE3 211 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 KLK5Q9Y337 293 aaPredicted RBP1.79□□□□□ -2.12
SMC4-224ENST00000494612 TENM2Q9NT68 2774 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 FRAS1Q86XX4 4008 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 TRAV9-1A0A075B6T8 112 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 TRAV38-1A0A0B4J264 116 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 A0A1B0GWA3 101 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 HMGN4O00479 90 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 NDUFA2O43678 99 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 CREBL2O60519 120 aaPredicted RBP1.78□□□□□ -2.12
SMC4-224ENST00000494612 NPYP01303 97 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 GYPAP02724 150 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 IGKV1-16P04430 117 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 PRM2P04554 102 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 SMIM17P0DL12 118 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 GUCA1AP43080 201 aaPredicted RBP1.78□□□□□ -2.12
SMC4-224ENST00000494612 PCBD1P61457 104 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 B2MP61769 119 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 KLRD1Q13241 179 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 ZNF705AQ6ZN79 300 aaPredicted RBP1.78□□□□□ -2.12
SMC4-224ENST00000494612 OR4X2Q8NGF9 303 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 OR52L1Q8NGH7 329 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 OR5J2Q8NH18 312 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 GNPDA2Q8TDQ7 276 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 H1FXQ92522 213 aaKnown RBP1.78□□□□□ -2.12
SMC4-224ENST00000494612 ISOC1Q96CN7 298 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 CCDC115Q96NT0 180 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 PRRT1Q99946 306 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 OR2H1Q9GZK4 316 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 CALML5Q9NZT1 146 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 FUT9Q9Y231 359 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 DNAJC15Q9Y5T4 150 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 TMEM56-RWDD3S4R434 201 aa1.78□□□□□ -2.12
SMC4-224ENST00000494612 HUWE1Q7Z6Z7 4374 aaKnown RBP1.77□□□□□ -2.13
SMC4-224ENST00000494612 ALMS1Q8TCU4 4167 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 IGKV1D-42A0A075B6H8 117 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 TMEM235A6NFC5 223 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 C5orf58C9J3I9 102 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 KPNA4O00629 521 aaPredicted RBP1.77□□□□□ -2.13
SMC4-224ENST00000494612 LEPROTO15243 131 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 NDUFB3O43676 98 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 C1QCP02747 245 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 OR4E1P0C645 316 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 ERP29P30040 261 aaKnown RBP1.77□□□□□ -2.13
SMC4-224ENST00000494612 S100A3P33764 101 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 XCL1P47992 114 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 DNAJB13P59910 316 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 GNG11P61952 73 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 CCDC153Q494R4 210 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 TRIQKQ629K1 86 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 OR2T2Q6IF00 324 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 SLC36A1Q7Z2H8 476 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 RNASE11Q8TAA1 199 aaKnown RBP1.77□□□□□ -2.13
SMC4-224ENST00000494612 SMCR5Q8TEV8 140 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 C10orf82Q8WW14 230 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 TEX37Q96LM6 180 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 HOPXQ9BPY8 73 aaPredicted RBP1.77□□□□□ -2.13
SMC4-224ENST00000494612 TXNDC17Q9BRA2 123 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 IL36BQ9NZH7 164 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 NAT8Q9UHE5 227 aa1.77□□□□□ -2.13
SMC4-224ENST00000494612 PLECQ15149 4684 aaKnown RBP1.76□□□□□ -2.13
SMC4-224ENST00000494612 ABCA13Q86UQ4 5058 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 IQCF6A8MYZ5 107 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 H3BT86 120 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 M0R1W7 72 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HMGB3O15347 200 aaKnown RBP1.76□□□□□ -2.13
SMC4-224ENST00000494612 ATG12O94817 140 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 IGF2P01344 180 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 IFNA1P01562 189 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 BPGMP07738 259 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST1H2BOP23527 126 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HLA-DMBP28068 263 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST1H2BBP33778 126 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST1H2BDP58876 126 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 TAS2R41P59536 307 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST1H2BCP62807 126 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 CCL20P78556 96 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 EMX2Q04743 252 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 RPL18Q07020 188 aaKnown RBP1.76□□□□□ -2.13
SMC4-224ENST00000494612 SS18Q15532 418 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 MIAQ16674 131 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST2H2BEQ16778 126 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.76□□□□□ -2.13
SMC4-224ENST00000494612 C10orf128Q5T292 105 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 FAM27BQ5VT28 67 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 AADACL3Q5VUY0 350 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 RPL22L1Q6P5R6 122 aaKnown RBP1.76□□□□□ -2.13
SMC4-224ENST00000494612 LYG2Q86SG7 212 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 SBSPONQ8IVN8 264 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 Q8N2B8 174 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 C10orf111Q8N326 155 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 FAM216BQ8N7L0 139 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 OR11H6Q8NGC7 330 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 SLC7A6Q92536 515 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST1H2BHQ93079 126 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 TOMM6Q96B49 74 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 IMMP2LQ96T52 175 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST1H2BNQ99877 126 aa1.76□□□□□ -2.13
SMC4-224ENST00000494612 HIST1H2BMQ99879 126 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms