RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 FREM3P0C091 2139 aa2.43□□□□□ -2.02
SMC2-205ENST00000493955 EXPH5Q8NEV8 1989 aa2.43□□□□□ -2.02
SMC2-205ENST00000493955 IGKV1-9A0A0C4DH69 117 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 G3V2T6 193 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 NDUFC2O95298 119 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 STATHP02808 62 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 SRP14P37108 136 aaKnown RBP2.42□□□□□ -2.02
SMC2-205ENST00000493955 VBP1P61758 197 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 DYNLT1P63172 113 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 GNG5P63218 68 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 CCSMST1Q4G0I0 132 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 AKR1C8PQ5T2L2 129 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 OR13D1Q8NGV5 346 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 OR13C6PQ8NH95 151 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 LCN9Q8WX39 176 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 NHP2Q9NX24 153 aaKnown RBP2.42□□□□□ -2.02
SMC2-205ENST00000493955 ZFHX3Q15911 3703 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 CCDC168Q8NDH2 2452 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 ITPR3Q14573 2671 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
SMC2-205ENST00000493955 NAV3Q8IVL0 2385 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 LOC285095A0A1B0GVY8 99 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 FUOMA2VDF0 154 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 AIPO00170 330 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 KDELR1P24390 212 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 DCDP81605 110 aaKnown RBP2.42□□□□□ -2.02
SMC2-205ENST00000493955 TFF3Q07654 80 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 TSNQ15631 228 aaKnown RBP2.42□□□□□ -2.02
SMC2-205ENST00000493955 SPANXN5Q5MJ07 72 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 RPS19BP1Q86WX3 136 aaKnown RBP2.42□□□□□ -2.02
SMC2-205ENST00000493955 AQP3Q92482 292 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 MED29Q9NX70 200 aa2.42□□□□□ -2.02
SMC2-205ENST00000493955 CHD3Q12873 2000 aaKnown RBP2.41□□□□□ -2.02
SMC2-205ENST00000493955 DNAJC13O75165 2243 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 TRAV17A0A0B4J275 112 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 TRBV6-5A0A0K0K1A5 114 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 C7orf71A4D174 169 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 TMEM212A6NML5 194 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 OR1I1O60431 355 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 PROSCO94903 275 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 PHBP35232 272 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 GNG3P63215 75 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 MYL5Q02045 173 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 STAG3L4Q8TBR4 150 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 NEK7Q8TDX7 302 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 SLAMF6Q96DU3 332 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 HOPXQ9BPY8 73 aaPredicted RBP2.41□□□□□ -2.02
SMC2-205ENST00000493955 SLC50A1Q9BRV3 221 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 GINS3Q9BRX5 216 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 TAS2R4Q9NYW5 299 aa2.41□□□□□ -2.02
SMC2-205ENST00000493955 AKAP6Q13023 2319 aa2.4□□□□□ -2.02
SMC2-205ENST00000493955 ABCA2Q9BZC7 2435 aa2.4□□□□□ -2.02
SMC2-205ENST00000493955 SETD2Q9BYW2 2564 aaPredicted RBP2.4□□□□□ -2.03
SMC2-205ENST00000493955 PRRC2CQ9Y520 2896 aaKnown RBP2.4□□□□□ -2.03
SMC2-205ENST00000493955 ACANP16112 2415 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 A0A0G2JMM0 328 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 A0A1W2PPB8 328 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 A0A1W2PRS3 328 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 KIR3DP1A8MWS1 328 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 H7C1C5 153 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 CST8O60676 142 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 TAS2R41P59536 307 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 LCN6P62502 163 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 ZNF563Q8TA94 476 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 TSLPQ969D9 159 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 SELENOSQ9BQE4 189 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 SH3BGRL3Q9H299 93 aa2.4□□□□□ -2.03
SMC2-205ENST00000493955 LYRM2Q9NU23 88 aaPredicted RBP2.4□□□□□ -2.03
SMC2-205ENST00000493955 FBN3Q75N90 2809 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 H0YGG7 62 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 UQCRHP07919 91 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 RNASE4P34096 147 aaKnown RBP2.39□□□□□ -2.03
SMC2-205ENST00000493955 STX12Q86Y82 276 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 SMIM20Q8N5G0 67 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 ANP32BQ92688 251 aaKnown RBP2.39□□□□□ -2.03
SMC2-205ENST00000493955 TRABDQ9H4I3 376 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 SS18L2Q9UHA2 77 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 SSR3Q9UNL2 185 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 MED12Q93074 2177 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 NINQ8N4C6 2090 aa2.39□□□□□ -2.03
SMC2-205ENST00000493955 MTORP42345 2549 aa2.38□□□□□ -2.03
SMC2-205ENST00000493955 TAX1BP3O14907 124 aa2.38□□□□□ -2.03
SMC2-205ENST00000493955 BAALC-AS2P0C853 105 aa2.38□□□□□ -2.03
SMC2-205ENST00000493955 EXOC3-AS1Q8N2X6 119 aa2.38□□□□□ -2.03
SMC2-205ENST00000493955 SLC35A3Q9Y2D2 325 aa2.38□□□□□ -2.03
SMC2-205ENST00000493955 UFC1Q9Y3C8 167 aa2.38□□□□□ -2.03
SMC2-205ENST00000493955 TACC2O95359 2948 aa2.38□□□□□ -2.03
SMC2-205ENST00000493955 SPG11Q96JI7 2443 aa2.38□□□□□ -2.03
SMC2-205ENST00000493955 FLNAP21333 2647 aaKnown RBP2.37□□□□□ -2.03
SMC2-205ENST00000493955 VPS13CQ709C8 3753 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 ANKHD1Q8IWZ3 2542 aaKnown RBP2.37□□□□□ -2.03
SMC2-205ENST00000493955 ABCA4P78363 2273 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 OR2T1O43869 369 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 BANF1O75531 89 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 MIFP14174 115 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 BTG2P78543 158 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 SCGB2B2Q4G0G5 96 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 BCL2L15Q5TBC7 163 aa2.37□□□□□ -2.03
SMC2-205ENST00000493955 TRIQKQ629K1 86 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms