RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 C9JQL5 133 aa12.76□□□□□ -0.37
PDLIM7-208ENST00000493815 SPART-AS1P0CW21 52 aa12.76□□□□□ -0.37
PDLIM7-208ENST00000493815 GNG4P50150 75 aa12.76□□□□□ -0.37
PDLIM7-208ENST00000493815 FAM162BQ5T6X4 162 aa12.76□□□□□ -0.37
PDLIM7-208ENST00000493815 PRR27Q6MZM9 219 aa12.76□□□□□ -0.37
PDLIM7-208ENST00000493815 PARLQ9H300 379 aa12.76□□□□□ -0.37
PDLIM7-208ENST00000493815 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
PDLIM7-208ENST00000493815 TMEM250H0YL14 139 aa12.75□□□□□ -0.37
PDLIM7-208ENST00000493815 IGLV2-8P01709 118 aa12.75□□□□□ -0.37
PDLIM7-208ENST00000493815 TYMSP04818 313 aa12.75□□□□□ -0.37
PDLIM7-208ENST00000493815 C12orf74Q32Q52 190 aa12.75□□□□□ -0.37
PDLIM7-208ENST00000493815 TDRG1Q3Y452 100 aa12.75□□□□□ -0.37
PDLIM7-208ENST00000493815 SNURFLB1AK76 121 aa12.74□□□□□ -0.37
PDLIM7-208ENST00000493815 M0R036 132 aa12.74□□□□□ -0.37
PDLIM7-208ENST00000493815 SRP19P09132 144 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-208ENST00000493815 DEFB130BP0DP73 79 aa12.74□□□□□ -0.37
PDLIM7-208ENST00000493815 DEFB130AP0DP74 79 aa12.74□□□□□ -0.37
PDLIM7-208ENST00000493815 Q6ZTC4 211 aa12.74□□□□□ -0.37
PDLIM7-208ENST00000493815 IGKV3D-20A0A0C4DH25 116 aa12.73□□□□□ -0.37
PDLIM7-208ENST00000493815 ORM1P02763 201 aa12.73□□□□□ -0.37
PDLIM7-208ENST00000493815 MGST1P10620 155 aaKnown RBP12.73□□□□□ -0.37
PDLIM7-208ENST00000493815 CLLU1Q5K131 121 aa12.73□□□□□ -0.37
PDLIM7-208ENST00000493815 SDF2L1Q9HCN8 221 aa12.73□□□□□ -0.37
PDLIM7-208ENST00000493815 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
PDLIM7-208ENST00000493815 TMSB15BA0A087X1C1 80 aa12.72□□□□□ -0.37
PDLIM7-208ENST00000493815 IGHV3-16A0A0C4DH30 117 aa12.72□□□□□ -0.37
PDLIM7-208ENST00000493815 TCL1AP56279 114 aa12.72□□□□□ -0.37
PDLIM7-208ENST00000493815 IBA57Q5T440 356 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-208ENST00000493815 Q6ZTI0 123 aa12.72□□□□□ -0.37
PDLIM7-208ENST00000493815 KCNS1Q96KK3 526 aa12.72□□□□□ -0.37
PDLIM7-208ENST00000493815 LYRM9A8MSI8 78 aa12.71□□□□□ -0.37
PDLIM7-208ENST00000493815 B4DEV8 164 aa12.71□□□□□ -0.37
PDLIM7-208ENST00000493815 DAD1P61803 113 aa12.71□□□□□ -0.37
PDLIM7-208ENST00000493815 ZNF415Q09FC8 603 aa12.71□□□□□ -0.37
PDLIM7-208ENST00000493815 OR5I1Q13606 314 aa12.71□□□□□ -0.37
PDLIM7-208ENST00000493815 PEA15Q15121 130 aa12.71□□□□□ -0.37
PDLIM7-208ENST00000493815 STARD9Q9P2P6 4700 aa12.71□□□□□ -0.37
PDLIM7-208ENST00000493815 GAGE12BA1L429 117 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 GAGE7O76087 117 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 RPL19P84098 196 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 DAZ2Q13117 558 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 OCC1Q8TAD7 63 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 PHLDA1Q8WV24 401 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 MRPL16Q9NX20 251 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 TRGV1A0A0A0MS02 117 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 GRIFINA4D1Z8 144 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 KRBOX1C9JBD0 128 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 ZNF575Q86XF7 245 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 SMIM7Q9BQ49 75 aa12.7□□□□□ -0.38
PDLIM7-208ENST00000493815 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
PDLIM7-208ENST00000493815 C9JCJ5 164 aa12.69□□□□□ -0.38
PDLIM7-208ENST00000493815 K7EN84 100 aa12.69□□□□□ -0.38
PDLIM7-208ENST00000493815 HTN3P15516 51 aa12.69□□□□□ -0.38
PDLIM7-208ENST00000493815 ZNF727A8MUV8 499 aa12.68□□□□□ -0.38
PDLIM7-208ENST00000493815 SPINK4O60575 86 aa12.67□□□□□ -0.38
PDLIM7-208ENST00000493815 RNASE3P12724 160 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-208ENST00000493815 LINC01559Q495D7 138 aa12.67□□□□□ -0.38
PDLIM7-208ENST00000493815 CASC10Q5T4H9 136 aa12.67□□□□□ -0.38
PDLIM7-208ENST00000493815 SMIM12Q96EX1 92 aa12.67□□□□□ -0.38
PDLIM7-208ENST00000493815 NDUFS6O75380 124 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-208ENST00000493815 DEFB131BA0A096LNP1 70 aa12.66□□□□□ -0.38
PDLIM7-208ENST00000493815 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
PDLIM7-208ENST00000493815 S100A4P26447 101 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-208ENST00000493815 ASIPP42127 132 aa12.66□□□□□ -0.38
PDLIM7-208ENST00000493815 LINC00612Q8N6U2 182 aa12.66□□□□□ -0.38
PDLIM7-208ENST00000493815 DAZAP1Q96EP5 407 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-208ENST00000493815 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
PDLIM7-208ENST00000493815 C19orf71A6NCJ1 209 aa12.65□□□□□ -0.38
PDLIM7-208ENST00000493815 H3BVH4 76 aa12.65□□□□□ -0.38
PDLIM7-208ENST00000493815 CEMP1Q6PRD7 247 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-208ENST00000493815 C9orf85Q96MD7 179 aa12.65□□□□□ -0.38
PDLIM7-208ENST00000493815 SPXQ9BT56 116 aa12.65□□□□□ -0.38
PDLIM7-208ENST00000493815 RNASE7Q9H1E1 156 aaKnown RBP12.65□□□□□ -0.38
PDLIM7-208ENST00000493815 SMDT1Q9H4I9 107 aa12.65□□□□□ -0.38
PDLIM7-208ENST00000493815 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
PDLIM7-208ENST00000493815 TRAV10A0A0B4J240 114 aa12.64□□□□□ -0.39
PDLIM7-208ENST00000493815 M0R2P5 195 aa12.64□□□□□ -0.39
PDLIM7-208ENST00000493815 GZMBP10144 247 aa12.64□□□□□ -0.39
PDLIM7-208ENST00000493815 LINC01551Q86U37 167 aa12.64□□□□□ -0.39
PDLIM7-208ENST00000493815 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
PDLIM7-208ENST00000493815 NUPR2A6NF83 97 aa12.63□□□□□ -0.39
PDLIM7-208ENST00000493815 P01737 135 aa12.63□□□□□ -0.39
PDLIM7-208ENST00000493815 IGHV3-53P01767 116 aa12.63□□□□□ -0.39
PDLIM7-208ENST00000493815 ARMS2P0C7Q2 107 aa12.63□□□□□ -0.39
PDLIM7-208ENST00000493815 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
PDLIM7-208ENST00000493815 SOHLH1Q5JUK2 328 aa12.63□□□□□ -0.39
PDLIM7-208ENST00000493815 NUDT10Q8NFP7 164 aa12.63□□□□□ -0.39
PDLIM7-208ENST00000493815 NUDT11Q96G61 164 aa12.63□□□□□ -0.39
PDLIM7-208ENST00000493815 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
PDLIM7-208ENST00000493815 ZNF876PQ49A33 203 aa12.62□□□□□ -0.39
PDLIM7-208ENST00000493815 RASL10AQ92737 203 aa12.62□□□□□ -0.39
PDLIM7-208ENST00000493815 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
PDLIM7-208ENST00000493815 IGLL5B9A064 214 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 F5H768 121 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 ATP5G1P05496 136 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
PDLIM7-208ENST00000493815 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms