RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ANGP03950 147 aaKnown RBP15.83■□□□□ 0.12
RNF40-203ENST00000493683 C15orf53Q8NAA6 179 aa15.83■□□□□ 0.12
RNF40-203ENST00000493683 PTPRDP23468 1912 aa15.83■□□□□ 0.12
RNF40-203ENST00000493683 KIAA2026Q5HYC2 2103 aa15.83■□□□□ 0.12
RNF40-203ENST00000493683 FAM215AQ9Y5M1 114 aa15.82■□□□□ 0.12
RNF40-203ENST00000493683 NBASA2RRP1 2371 aa15.82■□□□□ 0.12
RNF40-203ENST00000493683 GPR179Q6PRD1 2367 aa15.82■□□□□ 0.12
RNF40-203ENST00000493683 USF3Q68DE3 2245 aa15.82■□□□□ 0.12
RNF40-203ENST00000493683 J3QKU1 62 aa15.82■□□□□ 0.12
RNF40-203ENST00000493683 PLXNA4Q9HCM2 1894 aa15.82■□□□□ 0.12
RNF40-203ENST00000493683 THSD7BQ9C0I4 1608 aa15.81■□□□□ 0.12
RNF40-203ENST00000493683 DIAPH2-AS1Q14236 149 aa15.81■□□□□ 0.12
RNF40-203ENST00000493683 H0YGX0 51 aa15.81■□□□□ 0.12
RNF40-203ENST00000493683 WISP1O95388 367 aa15.81■□□□□ 0.12
RNF40-203ENST00000493683 FOXE3Q13461 319 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 Q6ZSR3 168 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 VWA8A3KMH1 1905 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 BAALC-AS2P0C853 105 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 HOXB4P17483 251 aaPredicted RBP15.8■□□□□ 0.12
RNF40-203ENST00000493683 NPBQ8NG41 125 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 ZNF524Q96C55 264 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 FANCMQ8IYD8 2048 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 CRYBA4P53673 196 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 FER1L5A0AVI2 2057 aa15.8■□□□□ 0.12
RNF40-203ENST00000493683 PLA2G2CQ5R387 149 aa15.79■□□□□ 0.12
RNF40-203ENST00000493683 Q9H8V8 135 aa15.79■□□□□ 0.12
RNF40-203ENST00000493683 NOTCH3Q9UM47 2321 aa15.79■□□□□ 0.12
RNF40-203ENST00000493683 IGFBPL1Q8WX77 278 aa15.79■□□□□ 0.12
RNF40-203ENST00000493683 IGF2BP2-AS1Q96M15 143 aa15.79■□□□□ 0.12
RNF40-203ENST00000493683 DOCK10Q96BY6 2186 aa15.79■□□□□ 0.12
RNF40-203ENST00000493683 TEX48A0A1B0GUV7 120 aa15.78■□□□□ 0.12
RNF40-203ENST00000493683 AMTNQ6UX39 209 aa15.78■□□□□ 0.12
RNF40-203ENST00000493683 VPREB3Q9UKI3 123 aa15.78■□□□□ 0.12
RNF40-203ENST00000493683 PHF3Q92576 2039 aaKnown RBP15.78■□□□□ 0.12
RNF40-203ENST00000493683 GP9P14770 177 aa15.78■□□□□ 0.12
RNF40-203ENST00000493683 KLF2Q9Y5W3 355 aaPredicted RBP15.78■□□□□ 0.12
RNF40-203ENST00000493683 C11orf53Q8IXP5 236 aa15.77■□□□□ 0.12
RNF40-203ENST00000493683 U3KQE9 123 aa15.77■□□□□ 0.12
RNF40-203ENST00000493683 DOCK7Q96N67 2140 aa15.77■□□□□ 0.12
RNF40-203ENST00000493683 C17orf77Q96MU5 243 aa15.77■□□□□ 0.12
RNF40-203ENST00000493683 SH2D6Q7Z4S9 175 aa15.77■□□□□ 0.11
RNF40-203ENST00000493683 GNRH2O43555 120 aa15.76■□□□□ 0.11
RNF40-203ENST00000493683 CRYGCP07315 174 aa15.76■□□□□ 0.11
RNF40-203ENST00000493683 KRTAP27-1Q3LI81 207 aa15.76■□□□□ 0.11
RNF40-203ENST00000493683 TINCRA0A1B0GVN0 87 aa15.76■□□□□ 0.11
RNF40-203ENST00000493683 IGLL5B9A064 214 aa15.76■□□□□ 0.11
RNF40-203ENST00000493683 LHBP01229 141 aa15.76■□□□□ 0.11
RNF40-203ENST00000493683 TCF20Q9UGU0 1960 aaKnown RBP15.76■□□□□ 0.11
RNF40-203ENST00000493683 C22orf46C9J442 243 aa15.76■□□□□ 0.11
RNF40-203ENST00000493683 HIGD1BQ9P298 99 aa15.75■□□□□ 0.11
RNF40-203ENST00000493683 PCP2Q8IVA1 136 aa15.75■□□□□ 0.11
RNF40-203ENST00000493683 FNDC1Q4ZHG4 1894 aaPredicted RBP15.75■□□□□ 0.11
RNF40-203ENST00000493683 I3L2K1 104 aa15.75■□□□□ 0.11
RNF40-203ENST00000493683 TRAV12-1A0A0B4J245 112 aa15.74■□□□□ 0.11
RNF40-203ENST00000493683 NBL1P41271 181 aa15.74■□□□□ 0.11
RNF40-203ENST00000493683 MAPK1IP1LQ8NDC0 245 aa15.74■□□□□ 0.11
RNF40-203ENST00000493683 CENPVL3A0A0U1RRI6 287 aa15.74■□□□□ 0.11
RNF40-203ENST00000493683 CCL25O15444 150 aa15.73■□□□□ 0.11
RNF40-203ENST00000493683 DAZ2Q13117 558 aaKnown RBP15.73■□□□□ 0.11
RNF40-203ENST00000493683 DAZ4Q86SG3 579 aaKnown RBP15.73■□□□□ 0.11
RNF40-203ENST00000493683 DAZ3Q9NR90 486 aaKnown RBP15.73■□□□□ 0.11
RNF40-203ENST00000493683 CTSZQ9UBR2 303 aa15.73■□□□□ 0.11
RNF40-203ENST00000493683 hADV29S1A0JD25 119 aa15.73■□□□□ 0.11
RNF40-203ENST00000493683 FUSP35637 526 aaKnown RBP eCLIP15.73■□□□□ 0.11
RNF40-203ENST00000493683 RNF138Q8WVD3 245 aa15.73■□□□□ 0.11
RNF40-203ENST00000493683 C16orf74Q96GX8 76 aa15.73■□□□□ 0.11
RNF40-203ENST00000493683 NOP10Q9NPE3 64 aaKnown RBP15.73■□□□□ 0.11
RNF40-203ENST00000493683 MED14OSP0DP75 135 aa15.72■□□□□ 0.11
RNF40-203ENST00000493683 IGLV11-55A0A075B6I3 123 aa15.72■□□□□ 0.11
RNF40-203ENST00000493683 CITED2Q99967 270 aaPredicted RBP15.72■□□□□ 0.11
RNF40-203ENST00000493683 XCL1P47992 114 aa15.72■□□□□ 0.11
RNF40-203ENST00000493683 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.72■□□□□ 0.111e-6■■■□□ 16.4
RNF40-203ENST00000493683 RBM3P98179 157 aaKnown RBP15.72■□□□□ 0.11
RNF40-203ENST00000493683 RNASE13Q5GAN3 156 aaKnown RBP15.71■□□□□ 0.11
RNF40-203ENST00000493683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.71■□□□□ 0.11
RNF40-203ENST00000493683 IGKV2-29A2NJV5 120 aaPredicted RBP15.71■□□□□ 0.11
RNF40-203ENST00000493683 MRAPQ8TCY5 172 aa15.71■□□□□ 0.11
RNF40-203ENST00000493683 ZFP2Q6ZN57 461 aa15.71■□□□□ 0.1
RNF40-203ENST00000493683 F6UB75 175 aa15.7■□□□□ 0.1
RNF40-203ENST00000493683 K7EIM0 57 aa15.7■□□□□ 0.1
RNF40-203ENST00000493683 K7EQD1 137 aa15.69■□□□□ 0.1
RNF40-203ENST00000493683 A0A0B4J2C4 111 aa15.69■□□□□ 0.1
RNF40-203ENST00000493683 TRBV6-1A0A0K0K1D8 114 aa15.69■□□□□ 0.1
RNF40-203ENST00000493683 ZMAT4Q9H898 229 aa15.69■□□□□ 0.1
RNF40-203ENST00000493683 CGB3P0DN86 165 aa15.69■□□□□ 0.1
RNF40-203ENST00000493683 C16orf54Q6UWD8 224 aa15.69■□□□□ 0.1
RNF40-203ENST00000493683 YLPM1P49750 1951 aaKnown RBP15.69■□□□□ 0.1
RNF40-203ENST00000493683 PLXNA2O75051 1894 aa15.69■□□□□ 0.1
RNF40-203ENST00000493683 ICOSQ9Y6W8 199 aa15.68■□□□□ 0.1
RNF40-203ENST00000493683 ATOX1O00244 68 aa15.68■□□□□ 0.1
RNF40-203ENST00000493683 PIP4P1Q86T03 277 aa15.68■□□□□ 0.1
RNF40-203ENST00000493683 IGHV7-81A0A0B4J1V7 117 aa15.68■□□□□ 0.1
RNF40-203ENST00000493683 TRAV4A0A0B4J268 109 aa15.68■□□□□ 0.1
RNF40-203ENST00000493683 DEFB112Q30KQ8 113 aa15.68■□□□□ 0.1
RNF40-203ENST00000493683 IGFL2Q6UWQ7 119 aa15.67■□□□□ 0.1
RNF40-203ENST00000493683 CCL24O00175 119 aa15.67■□□□□ 0.1
RNF40-203ENST00000493683 IGKV1-17P01599 117 aa15.67■□□□□ 0.1
RNF40-203ENST00000493683 UBE2BP63146 152 aa15.67■□□□□ 0.1
RNF40-203ENST00000493683 TEN1Q86WV5 123 aa15.67■□□□□ 0.1
RNF40-203ENST00000493683 SLX1AQ9BQ83 275 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms