RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 M0R2P5 195 aa9.05□□□□□ -0.96
GPNMB-213ENST00000492512 NBEAP1P0C6P0 100 aa9.05□□□□□ -0.96
GPNMB-213ENST00000492512 GATA1P15976 413 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-213ENST00000492512 ZFP69Q49AA0 526 aa9.05□□□□□ -0.96
GPNMB-213ENST00000492512 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
GPNMB-213ENST00000492512 NAGKQ9UJ70 344 aa9.05□□□□□ -0.96
GPNMB-213ENST00000492512 FAM24AA6NFZ4 105 aa9.04□□□□□ -0.96
GPNMB-213ENST00000492512 FGF7P21781 194 aa9.04□□□□□ -0.96
GPNMB-213ENST00000492512 VWC2Q2TAL6 325 aa9.04□□□□□ -0.96
GPNMB-213ENST00000492512 LELP1Q5T871 98 aa9.04□□□□□ -0.96
GPNMB-213ENST00000492512 Q6AWC8 147 aa9.04□□□□□ -0.96
GPNMB-213ENST00000492512 SLC25A2Q9BXI2 301 aa9.04□□□□□ -0.96
GPNMB-213ENST00000492512 TRAV8-3A0A0A6YYJ7 113 aa9.03□□□□□ -0.96
GPNMB-213ENST00000492512 FBLL1A6NHQ2 334 aaKnown RBP9.03□□□□□ -0.96
GPNMB-213ENST00000492512 S100A11P31949 105 aa9.03□□□□□ -0.96
GPNMB-213ENST00000492512 CSN1S1P47710 185 aa9.03□□□□□ -0.96
GPNMB-213ENST00000492512 GCSAMLQ5JQS6 135 aa9.03□□□□□ -0.96
GPNMB-213ENST00000492512 SLC25A29Q8N8R3 303 aa9.03□□□□□ -0.96
GPNMB-213ENST00000492512 MITD1Q8WV92 249 aa9.03□□□□□ -0.96
GPNMB-213ENST00000492512 PRADC1Q9BSG0 188 aa9.03□□□□□ -0.96
GPNMB-213ENST00000492512 OR51M1Q9H341 326 aa9.03□□□□□ -0.96
GPNMB-213ENST00000492512 RBAKDNA6NC62 111 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 RBFOX3A6NFN3 312 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 CCSO14618 274 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 RS1O15537 224 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 GNRH2O43555 120 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 SSNA1O43805 119 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 OR10J4P0C629 311 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 SULT1A1P50225 295 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 HBG1P69891 147 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 HBG2P69892 147 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 RHOHQ15669 191 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 PHYHIPLQ96FC7 376 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 FAM167A-AS1Q96KT0 104 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.97
GPNMB-213ENST00000492512 FAM25EA8MYX2 175 aa9.01□□□□□ -0.97
GPNMB-213ENST00000492512 PVALBP20472 110 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-213ENST00000492512 ACOT6Q3I5F7 207 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-213ENST00000492512 MIR17HGQ75NE6 70 aa9.01□□□□□ -0.97
GPNMB-213ENST00000492512 STX12Q86Y82 276 aa9.01□□□□□ -0.97
GPNMB-213ENST00000492512 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
GPNMB-213ENST00000492512 PAXXQ9BUH6 204 aa9.01□□□□□ -0.97
GPNMB-213ENST00000492512 GTSF1LQ9H1H1 148 aa9.01□□□□□ -0.97
GPNMB-213ENST00000492512 TRBV6-4A0A1B0GX49 114 aa9□□□□□ -0.97
GPNMB-213ENST00000492512 RANP62826 216 aaKnown RBP9□□□□□ -0.97
GPNMB-213ENST00000492512 TOR2AQ5JU69 321 aa9□□□□□ -0.97
GPNMB-213ENST00000492512 Q8N3U1 123 aa9□□□□□ -0.97
GPNMB-213ENST00000492512 ATP6V0E2Q8NHE4 81 aa9□□□□□ -0.97
GPNMB-213ENST00000492512 FXYD5Q96DB9 178 aa9□□□□□ -0.97
GPNMB-213ENST00000492512 NPCDR1Q9BY65 106 aa9□□□□□ -0.97
GPNMB-213ENST00000492512 C11orf1Q9H5F2 150 aa9□□□□□ -0.97
GPNMB-213ENST00000492512 IGSF23A1L1A6 192 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 C5orf51A6NDU8 294 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 IGLV2-8P01709 118 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 ATP6V1FQ16864 119 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 Q8N976 141 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 ASB13Q8WXK3 278 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 HYLS1Q96M11 299 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 ATP5SQ99766 215 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 LYRM2Q9NU23 88 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-213ENST00000492512 COX11Q9Y6N1 276 aa8.99□□□□□ -0.97
GPNMB-213ENST00000492512 IGHV3-73A0A0B4J1V6 119 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 GGTLC3B5MD39 225 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 OR7C2O60412 319 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 CIDEAO60543 219 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 TYMSP04818 313 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 S100A10P60903 97 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 ZNF876PQ49A33 203 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 DAZ4Q86SG3 579 aaKnown RBP8.98□□□□□ -0.97
GPNMB-213ENST00000492512 TMEM252Q8N6L7 170 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 SDF2L1Q9HCN8 221 aa8.98□□□□□ -0.97
GPNMB-213ENST00000492512 DAZ3Q9NR90 486 aaKnown RBP8.98□□□□□ -0.97
GPNMB-213ENST00000492512 TRAV21A0A0B4J279 112 aa8.97□□□□□ -0.97
GPNMB-213ENST00000492512 DIRC3C9JPN6 131 aa8.97□□□□□ -0.97
GPNMB-213ENST00000492512 GIPP09681 153 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-213ENST00000492512 RPL37AP61513 92 aaKnown RBP8.97□□□□□ -0.97
GPNMB-213ENST00000492512 CFAP126Q5VTH2 177 aa8.97□□□□□ -0.97
GPNMB-213ENST00000492512 TMED6Q8WW62 240 aa8.97□□□□□ -0.97
GPNMB-213ENST00000492512 RMI2Q96E14 147 aa8.97□□□□□ -0.97
GPNMB-213ENST00000492512 KCNS1Q96KK3 526 aa8.97□□□□□ -0.97
GPNMB-213ENST00000492512 SH3BGRL3Q9H299 93 aa8.97□□□□□ -0.97
GPNMB-213ENST00000492512 PKHD1L1Q86WI1 4243 aa8.97□□□□□ -0.97
GPNMB-213ENST00000492512 RNF222A6NCQ9 220 aa8.96□□□□□ -0.98
GPNMB-213ENST00000492512 NKX2-5P52952 324 aaPredicted RBP8.96□□□□□ -0.98
GPNMB-213ENST00000492512 THAP6Q8TBB0 222 aa8.96□□□□□ -0.98
GPNMB-213ENST00000492512 C2orf50Q96LR7 162 aa8.96□□□□□ -0.98
GPNMB-213ENST00000492512 SEC22CQ9BRL7 303 aa8.96□□□□□ -0.98
GPNMB-213ENST00000492512 IGLV2-11P01706 119 aa8.95□□□□□ -0.98
GPNMB-213ENST00000492512 MGST1P10620 155 aaKnown RBP8.95□□□□□ -0.98
GPNMB-213ENST00000492512 UBE2L3P68036 154 aaKnown RBP8.95□□□□□ -0.98
GPNMB-213ENST00000492512 DPPA3Q6W0C5 159 aa8.95□□□□□ -0.98
GPNMB-213ENST00000492512 RPH3ALQ9UNE2 315 aa8.95□□□□□ -0.98
GPNMB-213ENST00000492512 IGKV2D-24A0A075B6R9 120 aa8.94□□□□□ -0.98
GPNMB-213ENST00000492512 F6UZH7 168 aa8.94□□□□□ -0.98
GPNMB-213ENST00000492512 RAB32Q13637 225 aa8.94□□□□□ -0.98
GPNMB-213ENST00000492512 KCNIP2Q9NS61 270 aa8.94□□□□□ -0.98
GPNMB-213ENST00000492512 TRAV8-1A0A0A6YYK1 113 aa8.93□□□□□ -0.98
GPNMB-213ENST00000492512 HNRNPA3P51991 378 aaKnown RBP8.93□□□□□ -0.98
GPNMB-213ENST00000492512 OR5C1Q8NGR4 320 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms