RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SLC25A6P12236 298 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 PSG9Q00887 426 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 CT83Q5H943 113 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 SOHLH1Q5JUK2 328 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 EBLN2Q6P2I7 272 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 C5orf17Q8NAS9 161 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 ZNRF2Q8NHG8 242 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 TRGV9Q99603 122 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 CTDSP1Q9GZU7 261 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 DKK2Q9UBU2 259 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 LAMTOR2Q9Y2Q5 125 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 DNAH17Q9UFH2 4485 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 IGKV1D-37A0A075B6S9 117 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 A0A1B0GX51 115 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 C7orf77A4D0Y5 90 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 A8MTW9 85 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 H7BYZ3 331 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 RTL8CO15255 209 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 PITX3O75364 302 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 EVI2AP22794 236 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 INPP1P49441 399 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 ZNF345Q14585 488 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 PMVKQ15126 192 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 VWC2Q2TAL6 325 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 TEX43Q6ZNM6 134 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 Q6ZR54 194 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 LRTM2Q8N967 370 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 ZNF709Q8N972 641 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 DIRAS2Q96HU8 199 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 UHRF2Q96PU4 802 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 IMMP2LQ96T52 175 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 NIPSNAP3BQ9BS92 247 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 NDFIP1Q9BT67 221 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 PPDPFQ9H3Y8 114 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 RPRMQ9NS64 109 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
HDAC3-212ENST00000492407 FAT2Q9NYQ8 4349 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 A0A0J9YX75 114 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 HMGB3O15347 200 aaKnown RBP6.5□□□□□ -1.37
HDAC3-212ENST00000492407 HBE1P02100 147 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 FAUP35544 74 aaKnown RBP6.5□□□□□ -1.37
HDAC3-212ENST00000492407 RPS10P46783 165 aaKnown RBP6.5□□□□□ -1.37
HDAC3-212ENST00000492407 GALR1P47211 349 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 ZNF90Q03938 601 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 PYDC2Q56P42 97 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 GDF5OSQ5U4N7 250 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 FAM222AQ5U5X8 452 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 LYZL2Q7Z4W2 148 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 STPG4Q8N801 248 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 THAP8Q8NA92 274 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 OR5A1Q8NGJ0 315 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 RYR1P21817 5038 aa6.5□□□□□ -1.37
HDAC3-212ENST00000492407 DNAH2Q9P225 4427 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 RNF222A6NCQ9 220 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 GAGE7O76087 117 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 DUSP14O95147 198 aaKnown RBP6.49□□□□□ -1.37
HDAC3-212ENST00000492407 CRYGDP07320 174 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 GAGE12FP0CL80 117 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 GAGE12GP0CL81 117 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 GAGE12IP0CL82 117 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 TSPOP30536 169 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 HIST1H1AQ02539 215 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-212ENST00000492407 GAGE4Q13068 117 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 UBE2DNLQ8IWF7 75 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 C15orf53Q8NAA6 179 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 OR4B1Q8NGF8 309 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 OR1B1Q8NGR6 318 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 LYPD6BQ8NI32 183 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 IGF2BP2-AS1Q96M15 143 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 SAMD10Q9BYL1 202 aa6.49□□□□□ -1.37
HDAC3-212ENST00000492407 LOC102723971A0A1B0GUV8 181 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 LYRM9A8MSI8 78 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 CXCL3P19876 107 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 EMP1P54849 157 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 TCL1AP56279 114 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 LYZP61626 148 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 C16orf92Q96LL3 132 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 SLC25A21Q9BQT8 299 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-212ENST00000492407 GTSF1LQ9H1H1 148 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 AGRNO00468 2067 aa6.48□□□□□ -1.37
HDAC3-212ENST00000492407 IGHV3OR16-12A0A075B7B8 117 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 IGKV1OR2-108A0A075B7D4 117 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 B5MCH6 92 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-212ENST00000492407 K7EPK0 472 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 IGKV3-20P01619 116 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 IL5P05113 134 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 DAD1P61803 113 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 MEF2BQ02080 365 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-212ENST00000492407 AMTNQ6UX39 209 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 KCNRGQ8N5I3 272 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 C20orf173Q96LM9 149 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 DERL1Q9BUN8 251 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms