RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 BAALCQ8WXS3 180 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 RASL10AQ92737 203 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 ODF3Q96PU9 254 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 SPRY4Q9C004 299 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 CD59P13987 128 aa4.96□□□□□ -1.61
CCDC6-202ENST00000491922 C3orf36Q3SXR2 165 aa4.96□□□□□ -1.61
CCDC6-202ENST00000491922 NTN5Q8WTR8 489 aaPredicted RBP4.96□□□□□ -1.61
CCDC6-202ENST00000491922 TIMD4Q96H15 378 aa4.96□□□□□ -1.61
CCDC6-202ENST00000491922 SLC50A1Q9BRV3 221 aa4.96□□□□□ -1.61
CCDC6-202ENST00000491922 CTSZQ9UBR2 303 aa4.96□□□□□ -1.61
CCDC6-202ENST00000491922 INTS1Q8N201 2190 aaKnown RBP4.96□□□□□ -1.62
CCDC6-202ENST00000491922 ATRXP46100 2492 aa4.96□□□□□ -1.62
CCDC6-202ENST00000491922 IGHV4-4A0A075B6R2 117 aa4.96□□□□□ -1.62
CCDC6-202ENST00000491922 TRAV26-2A0A0B4J265 109 aa4.96□□□□□ -1.62
CCDC6-202ENST00000491922 ATXN8Q156A1 80 aa4.96□□□□□ -1.62
CCDC6-202ENST00000491922 SLC25A29Q8N8R3 303 aa4.96□□□□□ -1.62
CCDC6-202ENST00000491922 COL27A1Q8IZC6 1860 aaPredicted RBP4.96□□□□□ -1.62
CCDC6-202ENST00000491922 TRAV2A0A0B4J234 112 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 RBAKDNA6NC62 111 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 IGHG3P01860 377 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 Q6ZQT7 251 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 FAM57AQ8TBR7 257 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 CFHR4Q92496 578 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 KLK15Q9H2R5 256 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 SMIM9A6NGZ8 99 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 F8WDY8 70 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 NDUFB3O43676 98 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 DLX6P56179 175 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 LY6DQ14210 128 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 PMS2CLQ68D20 193 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 TRPT1Q86TN4 253 aaKnown RBP4.95□□□□□ -1.62
CCDC6-202ENST00000491922 KLHL30-AS1Q8NEE0 82 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 TECTAO75443 2155 aa4.95□□□□□ -1.62
CCDC6-202ENST00000491922 ZFHX2Q9C0A1 2572 aaPredicted RBP4.94□□□□□ -1.62
CCDC6-202ENST00000491922 A0A0B4J2C4 111 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 IGKV3D-20A0A0C4DH25 116 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 H3BMM0 161 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 LGALS9O00182 355 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 IGHV3-33P01772 117 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 IGHV1-8P0DP01 117 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 CRIP2P52943 208 aaPredicted RBP4.94□□□□□ -1.62
CCDC6-202ENST00000491922 MFAP4P55083 255 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 SUMO2P61956 95 aaKnown RBP4.94□□□□□ -1.62
CCDC6-202ENST00000491922 LINC01620Q4KN68 170 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 SPANXN1Q5VSR9 72 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 C2orf66Q6UXQ4 117 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 UBE2WQ96B02 151 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 RNF5Q99942 180 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 IGHV1-3A0A0C4DH29 117 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 IGHV7-4-1A0A0J9YVY3 117 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 TRBV10-2A0A0K0K1G8 114 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 TIMM23O14925 209 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 TMEM155Q4W5P6 130 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 GFRALQ6UXV0 394 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 DYNAPQ8N1N2 210 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 LINC01587Q99440 93 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 PIMREGQ9BSJ6 248 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 SPANXDQ9BXN6 97 aa4.94□□□□□ -1.62
CCDC6-202ENST00000491922 PTPRZ1P23471 2315 aaPredicted RBP4.94□□□□□ -1.62
CCDC6-202ENST00000491922 FAM240AA0A1B0GVK7 77 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 DUSP14O95147 198 aaKnown RBP4.93□□□□□ -1.62
CCDC6-202ENST00000491922 FOXC1Q12948 553 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 TMEM263Q8WUH6 116 aaKnown RBP4.93□□□□□ -1.62
CCDC6-202ENST00000491922 DNAJC30Q96LL9 226 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 MED13Q9UHV7 2174 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 CACNA1HO95180 2353 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.93□□□□□ -1.62
CCDC6-202ENST00000491922 IGHV1-69DA0A0B4J2H0 117 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 TRBV7-7A0A0K0K1E9 115 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 TEX49A0A1B0GTD5 131 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 C11orf86A6NJI1 115 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 LOXP28300 417 aaPredicted RBP4.93□□□□□ -1.62
CCDC6-202ENST00000491922 Q6ZS46 218 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 SMAD5-AS1Q9Y6J3 95 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 IGLV4-69A0A075B6H9 119 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 M0R381 172 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 PPP1R17O96001 155 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 HES1Q14469 280 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 IGFL4Q6B9Z1 124 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 TMEM105Q8N8V8 129 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 C11orf21Q9P2W6 132 aa4.93□□□□□ -1.62
CCDC6-202ENST00000491922 CCL8P80075 99 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 IGFBPL1Q8WX77 278 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 TMEM101Q96IK0 257 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 DUX5Q96PT3 197 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 C21orf62Q9NYP8 219 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 FRYLO94915 3013 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 CHD6Q8TD26 2715 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 IGLV11-55A0A075B6I3 123 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 TMEM178BH3BS89 294 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 BUB1B-PAK6H3BSN5 160 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 H3BT86 120 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 M0R2P5 195 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 IGLV1-47P01700 117 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 CRYGDP07320 174 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
CCDC6-202ENST00000491922 PMVKQ15126 192 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 Q1RN00 199 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 CHCHD5Q9BSY4 110 aa4.92□□□□□ -1.62
CCDC6-202ENST00000491922 MALRD1Q5VYJ5 2156 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms