RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 SHANK2-AS3Q9BTD1 123 aa3.29□□□□□ -1.88
CLIP4-211ENST00000491701 C1QTNF4Q9BXJ3 329 aa3.29□□□□□ -1.88
CLIP4-211ENST00000491701 SLC25A22Q9H936 323 aa3.29□□□□□ -1.88
CLIP4-211ENST00000491701 FUT9Q9Y231 359 aa3.29□□□□□ -1.88
CLIP4-211ENST00000491701 NOTCH1P46531 2555 aa3.29□□□□□ -1.88
CLIP4-211ENST00000491701 TRBV20OR9-2A0A075B6H5 130 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 FAM240AA0A1B0GVK7 77 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 MAP1LC3B2A6NCE7 125 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 RBFOX3A6NFN3 312 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 ZNF98A6NK75 572 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 FAM223BA6NKX1 122 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 GGTLC3B5MD39 225 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 CORTO00230 105 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 SOCS3O14543 225 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 IGLV2-11P01706 119 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 ARL14EPLP0DKL9 152 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 HLA-DMBP28068 263 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 ATP5G3P48201 142 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 SELENOTP62341 195 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 GUCA2BQ16661 112 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 ACOT6Q3I5F7 207 aaPredicted RBP3.28□□□□□ -1.88
CLIP4-211ENST00000491701 FAM78BQ5VT40 261 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 FAM223AQ8IWN6 122 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 C3orf56Q8N813 242 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 ZNF418Q8TF45 676 aaPredicted RBP3.28□□□□□ -1.88
CLIP4-211ENST00000491701 TVP23CQ96ET8 276 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 USMG5Q96IX5 58 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 C20orf144Q9BQM9 153 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 SLC25A39Q9BZJ4 359 aaPredicted RBP3.28□□□□□ -1.88
CLIP4-211ENST00000491701 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 MAP1LC3BQ9GZQ8 125 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 ZNF355PQ9NSJ1 428 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 TMEM14CQ9P0S9 112 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 DOK5Q9P104 306 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 CARHSP1Q9Y2V2 147 aaKnown RBP3.28□□□□□ -1.88
CLIP4-211ENST00000491701 NOTCH3Q9UM47 2321 aa3.28□□□□□ -1.88
CLIP4-211ENST00000491701 TRAV30A0A087WSZ9 112 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 TRBV7-1A0A0A6YYK4 115 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 ZFP92A6NM28 416 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 TMEM238C9JI98 176 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 DNASE2O00115 360 aaPredicted RBP3.27□□□□□ -1.89
CLIP4-211ENST00000491701 SLC17A3O00476 420 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 CYB5BO43169 146 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 ZNF207O43670 478 aaKnown RBP3.27□□□□□ -1.89
CLIP4-211ENST00000491701 HYPMO75409 117 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 IGLL1P15814 213 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 ORM2P19652 201 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 PFN2P35080 140 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 TPPP2P59282 170 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 DEFB1P60022 68 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 ZNF616Q08AN1 781 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 NDUFA5Q16718 116 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 AKR1C8PQ5T2L2 129 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 EIF5AL1Q6IS14 154 aaKnown RBP3.27□□□□□ -1.89
CLIP4-211ENST00000491701 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 Q6ZVH6 145 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 LINC00305Q7Z4B0 112 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.27□□□□□ -1.89
CLIP4-211ENST00000491701 RXFP4Q8TDU9 374 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 LINC00479Q96M42 142 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 DUX3Q96PT4 197 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 SMPXQ9UHP9 88 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 MUC4Q99102 2169 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 IGHV3OR16-13A0A075B7E8 117 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 IGHV3-49A0A0A0MS15 119 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 IGHV3-74A0A0B4J1X5 117 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 RPL37AP8A6NKH3 93 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 C17orf112F2Z3M2 114 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 LGALS9O00182 355 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 SCO1O75880 301 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 IL4P05112 153 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 LGALS1P09382 135 aaKnown RBP3.27□□□□□ -1.89
CLIP4-211ENST00000491701 OR10J4P0C629 311 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 NBEAP1P0C6P0 100 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 BCL2P10415 239 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 CRIP1P50238 77 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 RHOBP62745 196 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 DEFB136Q30KP8 78 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 Q56UQ5 140 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 KHDC3LQ587J8 217 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 C10orf113Q5VZT2 155 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 REG3GQ6UW15 175 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 LINC00322Q6ZN03 302 aaPredicted RBP3.27□□□□□ -1.89
CLIP4-211ENST00000491701 TCF24Q7RTU0 167 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 FAM24BQ8N5W8 94 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 Q8N9P0 234 aaPredicted RBP3.27□□□□□ -1.89
CLIP4-211ENST00000491701 Q8WTZ3 238 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 TMEM190Q8WZ59 177 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 MRAP2Q96G30 205 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 TMEM208Q9BTX3 173 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 DERL1Q9BUN8 251 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 MRPL32Q9BYC8 188 aaKnown RBP3.27□□□□□ -1.89
CLIP4-211ENST00000491701 XCL2Q9UBD3 114 aa3.27□□□□□ -1.89
CLIP4-211ENST00000491701 DNAH9Q9NYC9 4486 aa3.26□□□□□ -1.89
CLIP4-211ENST00000491701 TRBV19A0A075B6N1 114 aa3.26□□□□□ -1.89
CLIP4-211ENST00000491701 IGHV3-66A0A0C4DH42 116 aa3.26□□□□□ -1.89
CLIP4-211ENST00000491701 IGHV7-4-1A0A0J9YVY3 117 aa3.26□□□□□ -1.89
CLIP4-211ENST00000491701 TINCRA0A1B0GVN0 87 aa3.26□□□□□ -1.89
CLIP4-211ENST00000491701 IZUMO1RA6ND01 250 aa3.26□□□□□ -1.89
CLIP4-211ENST00000491701 H7C1H1 209 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms