RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 ZNF80P51504 273 aaPredicted RBP14.27□□□□□ -0.13
SHROOM3-209ENST00000490690 DAZ2Q13117 558 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-209ENST00000490690 SPXQ9BT56 116 aa14.27□□□□□ -0.13
SHROOM3-209ENST00000490690 HUWE1Q7Z6Z7 4374 aaKnown RBP14.27□□□□□ -0.13
SHROOM3-209ENST00000490690 XKRY2A2RUG3 117 aa14.26□□□□□ -0.13
SHROOM3-209ENST00000490690 EMP1P54849 157 aa14.26□□□□□ -0.13
SHROOM3-209ENST00000490690 TCL1AP56279 114 aa14.26□□□□□ -0.13
SHROOM3-209ENST00000490690 LINC01559Q495D7 138 aa14.26□□□□□ -0.13
SHROOM3-209ENST00000490690 SOHLH1Q5JUK2 328 aa14.26□□□□□ -0.13
SHROOM3-209ENST00000490690 NHLRC2Q8NBF2 726 aa14.26□□□□□ -0.13
SHROOM3-209ENST00000490690 B4DEV8 164 aa14.25□□□□□ -0.13
SHROOM3-209ENST00000490690 CXCL1P09341 107 aa14.25□□□□□ -0.13
SHROOM3-209ENST00000490690 AZU1P20160 251 aa14.25□□□□□ -0.13
SHROOM3-209ENST00000490690 PRR27Q6MZM9 219 aa14.25□□□□□ -0.13
SHROOM3-209ENST00000490690 DKK2Q9UBU2 259 aa14.25□□□□□ -0.13
SHROOM3-209ENST00000490690 STAB2Q8WWQ8 2551 aa14.25□□□□□ -0.13
SHROOM3-209ENST00000490690 TRBV20OR9-2A0A075B6H5 130 aa14.24□□□□□ -0.13
SHROOM3-209ENST00000490690 DEFB4AO15263 64 aa14.24□□□□□ -0.13
SHROOM3-209ENST00000490690 S100A4P26447 101 aaKnown RBP14.24□□□□□ -0.13
SHROOM3-209ENST00000490690 ASIPP42127 132 aa14.24□□□□□ -0.13
SHROOM3-209ENST00000490690 RPS20P60866 119 aaKnown RBP14.24□□□□□ -0.13
SHROOM3-209ENST00000490690 LGALS9BQ3B8N2 356 aa14.24□□□□□ -0.13
SHROOM3-209ENST00000490690 NDUFAF3Q9BU61 184 aa14.24□□□□□ -0.13
SHROOM3-209ENST00000490690 IGLV2-8P01709 118 aa14.23□□□□□ -0.13
SHROOM3-209ENST00000490690 P01737 135 aa14.23□□□□□ -0.13
SHROOM3-209ENST00000490690 TYMSP04818 313 aa14.23□□□□□ -0.13
SHROOM3-209ENST00000490690 CRIP1P50238 77 aa14.23□□□□□ -0.13
SHROOM3-209ENST00000490690 OR5I1Q13606 314 aa14.23□□□□□ -0.13
SHROOM3-209ENST00000490690 TMEM241Q24JQ0 296 aa14.23□□□□□ -0.13
SHROOM3-209ENST00000490690 FAM222AQ5U5X8 452 aa14.23□□□□□ -0.13
SHROOM3-209ENST00000490690 C11orf72Q8NBR9 251 aa14.23□□□□□ -0.13
SHROOM3-209ENST00000490690 DAD1P61803 113 aa14.22□□□□□ -0.13
SHROOM3-209ENST00000490690 DNLZQ5SXM8 178 aa14.22□□□□□ -0.13
SHROOM3-209ENST00000490690 NOP10Q9NPE3 64 aaKnown RBP14.22□□□□□ -0.13
SHROOM3-209ENST00000490690 GSN-AS1Q9NRJ2 163 aa14.22□□□□□ -0.13
SHROOM3-209ENST00000490690 NAT8Q9UHE5 227 aa14.22□□□□□ -0.13
SHROOM3-209ENST00000490690 IGKV3D-20A0A0C4DH25 116 aa14.21□□□□□ -0.13
SHROOM3-209ENST00000490690 IGHV3-16A0A0C4DH30 117 aa14.21□□□□□ -0.13
SHROOM3-209ENST00000490690 PLAC8L1A1L4L8 177 aa14.21□□□□□ -0.13
SHROOM3-209ENST00000490690 KRBOX1C9JBD0 128 aa14.21□□□□□ -0.13
SHROOM3-209ENST00000490690 OCC1Q8TAD7 63 aa14.21□□□□□ -0.13
SHROOM3-209ENST00000490690 TENM3Q9P273 2699 aa14.2□□□□□ -0.14
SHROOM3-209ENST00000490690 LINC00862A6NCI5 91 aa14.2□□□□□ -0.14
SHROOM3-209ENST00000490690 MED14OSP0DP75 135 aa14.2□□□□□ -0.14
SHROOM3-209ENST00000490690 SRSF3P84103 164 aaKnown RBP14.2□□□□□ -0.14
SHROOM3-209ENST00000490690 Q6ZQT7 251 aa14.2□□□□□ -0.14
SHROOM3-209ENST00000490690 IL36BQ9NZH7 164 aa14.2□□□□□ -0.14
SHROOM3-209ENST00000490690 C11orf21Q9P2W6 132 aa14.2□□□□□ -0.14
SHROOM3-209ENST00000490690 C19orf71A6NCJ1 209 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 M0R036 132 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 M0R2P5 195 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 PRM2P04554 102 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 SFTA3P0C7M3 94 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 PIK3CD-AS1Q5SR53 167 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 FAM231DQ6ZW35 169 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 LINC01551Q86U37 167 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 PTH2Q96A98 100 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 C18orf15Q96N68 181 aa14.19□□□□□ -0.14
SHROOM3-209ENST00000490690 PGPEP1LA6NFU8 196 aa14.18□□□□□ -0.14
SHROOM3-209ENST00000490690 GNRH2O43555 120 aa14.18□□□□□ -0.14
SHROOM3-209ENST00000490690 SPINK4O60575 86 aa14.18□□□□□ -0.14
SHROOM3-209ENST00000490690 PNRC1Q12796 327 aaPredicted RBP14.18□□□□□ -0.14
SHROOM3-209ENST00000490690 COMMD7Q86VX2 200 aa14.18□□□□□ -0.14
SHROOM3-209ENST00000490690 MUC7Q8TAX7 377 aa14.18□□□□□ -0.14
SHROOM3-209ENST00000490690 MDFICQ9P1T7 246 aa14.18□□□□□ -0.14
SHROOM3-209ENST00000490690 TRGV1A0A0A0MS02 117 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 NUPR2A6NF83 97 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 C9JQL5 133 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 C3orf84H3BNL1 204 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 ERVFC1-1P60608 527 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 LINC00612Q8N6U2 182 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 C15orf54Q8N8G6 183 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 SYT8Q8NBV8 401 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 OR2D3Q8NGH3 330 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 CELA1Q9UNI1 258 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 TGP01266 2768 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 COL7A1Q02388 2944 aa14.17□□□□□ -0.14
SHROOM3-209ENST00000490690 TRGV2A0A075B6R0 118 aa14.16□□□□□ -0.14
SHROOM3-209ENST00000490690 TRAV10A0A0B4J240 114 aa14.16□□□□□ -0.14
SHROOM3-209ENST00000490690 CIDEAO60543 219 aa14.16□□□□□ -0.14
SHROOM3-209ENST00000490690 DEFB130BP0DP73 79 aa14.16□□□□□ -0.14
SHROOM3-209ENST00000490690 DEFB130AP0DP74 79 aa14.16□□□□□ -0.14
SHROOM3-209ENST00000490690 CT83Q5H943 113 aa14.16□□□□□ -0.14
SHROOM3-209ENST00000490690 RASL10AQ92737 203 aa14.16□□□□□ -0.14
SHROOM3-209ENST00000490690 C9orf85Q96MD7 179 aa14.16□□□□□ -0.14
SHROOM3-209ENST00000490690 A0A1W2PPQ1 181 aa14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 K7EN84 100 aa14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 ATP5G1P05496 136 aa14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 NANOS2P60321 138 aaKnown RBP14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 C12orf74Q32Q52 190 aa14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 NUDT10Q8NFP7 164 aa14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 NUDT11Q96G61 164 aa14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 RPP21Q9H633 154 aaKnown RBP14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 PHLDA3Q9Y5J5 127 aa14.15□□□□□ -0.14
SHROOM3-209ENST00000490690 GATCO43716 136 aaKnown RBP14.14□□□□□ -0.15
SHROOM3-209ENST00000490690 ADIRFQ15847 76 aa14.14□□□□□ -0.15
SHROOM3-209ENST00000490690 OSTCQ9NRP0 149 aa14.14□□□□□ -0.15
SHROOM3-209ENST00000490690 KLK5Q9Y337 293 aaPredicted RBP14.14□□□□□ -0.15
SHROOM3-209ENST00000490690 TMSB15BA0A087X1C1 80 aa14.13□□□□□ -0.15
SHROOM3-209ENST00000490690 GAGE12BA1L429 117 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms