RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 C19orf71A6NCJ1 209 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 ZNF727A8MUV8 499 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 CXCL1P09341 107 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 LINC01559Q495D7 138 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 C11orf72Q8NBR9 251 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 IL17DQ8TAD2 202 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 OCC1Q8TAD7 63 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 SDF2L1Q9HCN8 221 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 C11orf21Q9P2W6 132 aa8.95□□□□□ -0.98
HDAC1-210ENST00000490081 IGKV3D-20A0A0C4DH25 116 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 CBY3A6NI87 242 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 KRBOX1C9JBD0 128 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 SH2D1AO60880 128 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 TCL1AP56279 114 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 TMEM241Q24JQ0 296 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 SOHLH1Q5JUK2 328 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 ZNF575Q86XF7 245 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 PTH2Q96A98 100 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 SPXQ9BT56 116 aa8.94□□□□□ -0.98
HDAC1-210ENST00000490081 TIMM8BQ9Y5J9 83 aaPredicted RBP8.94□□□□□ -0.98
HDAC1-210ENST00000490081 IGHV3-16A0A0C4DH30 117 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 FAM231DQ6ZW35 169 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 LINC00612Q8N6U2 182 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 NHLRC2Q8NBF2 726 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 C18orf15Q96N68 181 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 NDUFAF3Q9BU61 184 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 DKK2Q9UBU2 259 aa8.93□□□□□ -0.98
HDAC1-210ENST00000490081 SNURFLB1AK76 121 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 PRM2P04554 102 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 TYMSP04818 313 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 HTN1P15515 57 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 PIK3CD-AS1Q5SR53 167 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 MUC21Q5SSG8 566 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 LINC01551Q86U37 167 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 DAZAP1Q96EP5 407 aaKnown RBP8.92□□□□□ -0.98
HDAC1-210ENST00000490081 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
HDAC1-210ENST00000490081 PGPEP1LA6NFU8 196 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 B4DEV8 164 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 K7EN84 100 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 GNRH2O43555 120 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 ORM1P02763 201 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 MED14OSP0DP75 135 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 MGST1P10620 155 aaKnown RBP8.91□□□□□ -0.98
HDAC1-210ENST00000490081 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
HDAC1-210ENST00000490081 ZNF415Q09FC8 603 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 RASL10AQ92737 203 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 C9orf85Q96MD7 179 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 WWC2-AS2Q96NR7 200 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 IL36BQ9NZH7 164 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 MDFICQ9P1T7 246 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 RYR3Q15413 4870 aa8.91□□□□□ -0.98
HDAC1-210ENST00000490081 TMEM218A2RU14 115 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 CXorf65A6NEN9 183 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 SPINK4O60575 86 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 SFTA3P0C7M3 94 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 RNASE3P12724 160 aaKnown RBP8.9□□□□□ -0.98
HDAC1-210ENST00000490081 CEBPGP53567 150 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 FAM222AQ5U5X8 452 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 COMMD7Q86VX2 200 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 NUDT10Q8NFP7 164 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 C11orf45Q8TAV5 145 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 NUDT11Q96G61 164 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 SSBP4Q9BWG4 385 aaPredicted RBP8.9□□□□□ -0.98
HDAC1-210ENST00000490081 SCRT2Q9NQ03 307 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 GSN-AS1Q9NRJ2 163 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 OSTCQ9NRP0 149 aa8.9□□□□□ -0.98
HDAC1-210ENST00000490081 XKRY2A2RUG3 117 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 DEFB4AO15263 64 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 P01737 135 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 ASIPP42127 132 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 RPL23P62829 140 aaKnown RBP8.89□□□□□ -0.99
HDAC1-210ENST00000490081 PNRC1Q12796 327 aaPredicted RBP8.89□□□□□ -0.99
HDAC1-210ENST00000490081 OR5I1Q13606 314 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 CT83Q5H943 113 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 PRR27Q6MZM9 219 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
HDAC1-210ENST00000490081 NAGKQ9UJ70 344 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 MUC4Q99102 2169 aa8.89□□□□□ -0.99
HDAC1-210ENST00000490081 M0R2P5 195 aa8.88□□□□□ -0.99
HDAC1-210ENST00000490081 OR5AL1P0C617 328 aa8.88□□□□□ -0.99
HDAC1-210ENST00000490081 C12orf74Q32Q52 190 aa8.88□□□□□ -0.99
HDAC1-210ENST00000490081 C10orf91Q5T1B1 145 aa8.88□□□□□ -0.99
HDAC1-210ENST00000490081 ISOC2Q96AB3 205 aa8.88□□□□□ -0.99
HDAC1-210ENST00000490081 SEC11CQ9BY50 192 aa8.88□□□□□ -0.99
HDAC1-210ENST00000490081 CELA1Q9UNI1 258 aa8.88□□□□□ -0.99
HDAC1-210ENST00000490081 DNAH7Q8WXX0 4024 aa8.88□□□□□ -0.99
HDAC1-210ENST00000490081 FAM231BA6NCW3 169 aa8.87□□□□□ -0.99
HDAC1-210ENST00000490081 M0R036 132 aa8.87□□□□□ -0.99
HDAC1-210ENST00000490081 SNAI2O43623 268 aa8.87□□□□□ -0.99
HDAC1-210ENST00000490081 CIDEAO60543 219 aa8.87□□□□□ -0.99
HDAC1-210ENST00000490081 EMP1P54849 157 aa8.87□□□□□ -0.99
HDAC1-210ENST00000490081 FOXA3P55318 350 aaPredicted RBP8.87□□□□□ -0.99
HDAC1-210ENST00000490081 WDR73Q6P4I2 378 aa8.87□□□□□ -0.99
HDAC1-210ENST00000490081 OR2D3Q8NGH3 330 aa8.87□□□□□ -0.99
HDAC1-210ENST00000490081 RPP21Q9H633 154 aaKnown RBP8.87□□□□□ -0.99
HDAC1-210ENST00000490081 A0A1W2PPQ1 181 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms