RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 Q6ZQT7 251 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 CHAC2Q8WUX2 184 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 KCNS1Q96KK3 526 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 SLIRPQ9GZT3 109 aaKnown RBP4.29□□□□□ -1.72
PTCH1-211ENST00000488809 SDF2L1Q9HCN8 221 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 KCNIP2Q9NS61 270 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 LSM5Q9Y4Y9 91 aaKnown RBP4.29□□□□□ -1.72
PTCH1-211ENST00000488809 A0A087WWC5 75 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 DIRC3C9JPN6 131 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 SMIM18P0DKX4 95 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 MGST1P10620 155 aaKnown RBP4.28□□□□□ -1.72
PTCH1-211ENST00000488809 SULT1A1P50225 295 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
PTCH1-211ENST00000488809 CNPY1Q3B7I2 92 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 FAM74A1Q5RGS3 127 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 KCNIP4Q6PIL6 250 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 SLC25A29Q8N8R3 303 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 MITD1Q8WV92 249 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 TMED6Q8WW62 240 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 BAALCQ8WXS3 180 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 PAXXQ9BUH6 204 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
PTCH1-211ENST00000488809 IGKV2D-24A0A075B6R9 120 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 FAM24AA6NFZ4 105 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 FAM25EA8MYX2 175 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 OR7C2O60412 319 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 TYMSP04818 313 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 ELOBQ15370 118 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 ZNF876PQ49A33 203 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 LINC01620Q4KN68 170 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 SPANXN2Q5MJ10 180 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 TRIQKQ629K1 86 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 OR10G9Q8NGN4 311 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 CMTM2Q8TAZ6 248 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 ASB13Q8WXK3 278 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 PHYHIPLQ96FC7 376 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 C2orf50Q96LR7 162 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 NPCDR1Q9BY65 106 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 LYRM2Q9NU23 88 aaPredicted RBP4.27□□□□□ -1.73
PTCH1-211ENST00000488809 RPH3ALQ9UNE2 315 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 V9GYH0 126 aa4.27□□□□□ -1.73
PTCH1-211ENST00000488809 RNF222A6NCQ9 220 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 C17orf112F2Z3M2 114 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 GNRH2O43555 120 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 S100A10P60903 97 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 RANP62826 216 aaKnown RBP4.26□□□□□ -1.73
PTCH1-211ENST00000488809 UBE2L3P68036 154 aaKnown RBP4.26□□□□□ -1.73
PTCH1-211ENST00000488809 FFAR4Q5NUL3 377 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 CFAP126Q5VTH2 177 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 TMEM252Q8N6L7 170 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 HSD17B11Q8NBQ5 300 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 FXYD5Q96DB9 178 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 FAM167A-AS1Q96KT0 104 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 NDFIP1Q9BT67 221 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 FLVCR2Q9UPI3 526 aa4.26□□□□□ -1.73
PTCH1-211ENST00000488809 A0A087WX48 190 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 IGHV3-73A0A0B4J1V6 119 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 A0A0D9SG52 128 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 CCSO14618 274 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 FGF8P55075 233 aaPredicted RBP4.25□□□□□ -1.73
PTCH1-211ENST00000488809 TAS2R45P59539 299 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 KHDC3LQ587J8 217 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 GCSAMLQ5JQS6 135 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 Q6ZRU5 148 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 DAZ4Q86SG3 579 aaKnown RBP4.25□□□□□ -1.73
PTCH1-211ENST00000488809 CYB561D1Q8N8Q1 229 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 CHCHD7Q9BUK0 85 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 NMES1Q9C002 83 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 DPH3P1Q9H4G8 78 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 TREM1Q9NP99 234 aa4.25□□□□□ -1.73
PTCH1-211ENST00000488809 DAZ3Q9NR90 486 aaKnown RBP4.25□□□□□ -1.73
PTCH1-211ENST00000488809 PGPA6NDG6 321 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 GAGE12JA6NER3 117 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 A8MWV9 139 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 H3BMQ9 156 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 Q0VG73 95 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 GAGE1Q13065 139 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 GAGE4Q13068 117 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 GAGE5Q13069 117 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 ZFP69Q49AA0 526 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 GAGE13Q4V321 117 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 ZFP2Q6ZN57 461 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 ARL6IP6Q8N6S5 226 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 THAP6Q8TBB0 222 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 PTH2Q96A98 100 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 UBE2WQ96B02 151 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 HYLS1Q96M11 299 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 C1orf43Q9BWL3 253 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 KLK12Q9UKR0 248 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 LRP2P98164 4655 aa4.24□□□□□ -1.73
PTCH1-211ENST00000488809 SERTM2A0A1B0GWG4 89 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 IGSF23A1L1A6 192 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 F6UZH7 168 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 K7EQM0 130 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 TAAR5O14804 337 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 CRPP02741 224 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 ZNF506Q5JVG8 444 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 PIK3CD-AS1Q5SR53 167 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms